RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 NISCHQ9Y2I1 1504 aa38.97■■■■□ 3.83
FOXA3-202ENST00000594297 ABCC9O60706 1549 aa35.65■■■■□ 3.3
FOXA3-202ENST00000594297 CCDC180Q9P1Z9 1646 aa35.27■■■■□ 3.24
FOXA3-202ENST00000594297 DNAJC5BQ9UF47 199 aa33.78■■■■□ 3
FOXA3-202ENST00000594297 RB1CC1Q8TDY2 1594 aa33.73■■■□□ 2.99
FOXA3-202ENST00000594297 NACADO15069 1562 aa33.37■■■□□ 2.93
FOXA3-202ENST00000594297 UNC13AQ9UPW8 1703 aa33.09■■■□□ 2.89
FOXA3-202ENST00000594297 PABPN1Q86U42 306 aaKnown RBP eCLIP33.02■■■□□ 2.88
FOXA3-202ENST00000594297 DCAF8L2P0C7V8 631 aa32.92■■■□□ 2.86
FOXA3-202ENST00000594297 BICRAQ9NZM4 1560 aa32.83■■■□□ 2.85
FOXA3-202ENST00000594297 MYO15BQ96JP2 1530 aa32.74■■■□□ 2.83
FOXA3-202ENST00000594297 SHROOM4Q9ULL8 1493 aa32.29■■■□□ 2.76
FOXA3-202ENST00000594297 ZCCHC6Q5VYS8 1495 aaKnown RBP32.24■■■□□ 2.75
FOXA3-202ENST00000594297 CC2D2AQ9P2K1 1620 aa32.22■■■□□ 2.75
FOXA3-202ENST00000594297 DCAF1Q9Y4B6 1507 aa32.16■■■□□ 2.74
FOXA3-202ENST00000594297 CECR2Q9BXF3 1484 aa32.15■■■□□ 2.74
FOXA3-202ENST00000594297 SCRIBQ14160 1630 aa32.11■■■□□ 2.73
FOXA3-202ENST00000594297 EIF4G1Q04637 1599 aaKnown RBP32.03■■■□□ 2.72
FOXA3-202ENST00000594297 DNAJC5Q9H3Z4 198 aa31.32■■■□□ 2.6
FOXA3-202ENST00000594297 CUX2O14529 1486 aa30.92■■■□□ 2.54
FOXA3-202ENST00000594297 ERCC6Q03468 1493 aa30.8■■■□□ 2.52
FOXA3-202ENST00000594297 NCAPD3P42695 1498 aa30.77■■■□□ 2.52
FOXA3-202ENST00000594297 ATAD2BQ9ULI0 1458 aa30.64■■■□□ 2.5
FOXA3-202ENST00000594297 HMGXB3Q12766 1538 aa30.59■■■□□ 2.49
FOXA3-202ENST00000594297 SMARCA4P51532 1647 aa30.57■■■□□ 2.48
FOXA3-202ENST00000594297 SMARCA2P51531 1590 aa30.55■■■□□ 2.48
FOXA3-202ENST00000594297 NESP48681 1621 aa30.51■■■□□ 2.48
FOXA3-202ENST00000594297 THOC2Q8NI27 1593 aaKnown RBP30.38■■■□□ 2.45
FOXA3-202ENST00000594297 BAZ1BQ9UIG0 1483 aaKnown RBP30.33■■■□□ 2.45
FOXA3-202ENST00000594297 BAZ1AQ9NRL2 1556 aaPredicted RBP30.29■■■□□ 2.44
FOXA3-202ENST00000594297 PEG3Q9GZU2 1588 aa30.25■■■□□ 2.43
FOXA3-202ENST00000594297 LAMC3Q9Y6N6 1575 aa30.22■■■□□ 2.43
FOXA3-202ENST00000594297 KIF21AQ7Z4S6 1674 aa30.18■■■□□ 2.42
FOXA3-202ENST00000594297 MROH2BQ7Z745 1585 aa30.04■■■□□ 2.4
FOXA3-202ENST00000594297 PDS5BQ9NTI5 1447 aa29.97■■■□□ 2.39
FOXA3-202ENST00000594297 MRC2Q9UBG0 1479 aa29.82■■■□□ 2.36
FOXA3-202ENST00000594297 WDR62O43379 1518 aa29.81■■■□□ 2.36
FOXA3-202ENST00000594297 TRIM41Q8WV44 630 aa29.79■■■□□ 2.36
FOXA3-202ENST00000594297 CADPSQ9ULU8 1353 aa29.78■■■□□ 2.36
FOXA3-202ENST00000594297 WIZO95785 1651 aa29.69■■■□□ 2.34
FOXA3-202ENST00000594297 CEP164Q9UPV0 1460 aa29.61■■■□□ 2.33
FOXA3-202ENST00000594297 FANCD2Q9BXW9 1451 aa29.51■■■□□ 2.31
FOXA3-202ENST00000594297 CFTRP13569 1480 aa29.4■■■□□ 2.3
FOXA3-202ENST00000594297 URB2Q14146 1524 aaKnown RBP29.34■■■□□ 2.29
FOXA3-202ENST00000594297 OSCARQ8IYS5 282 aa29.28■■■□□ 2.28
FOXA3-202ENST00000594297 TOP2AP11388 1531 aaKnown RBP29.28■■■□□ 2.28
FOXA3-202ENST00000594297 PRDM2Q13029 1718 aa29.21■■■□□ 2.27
FOXA3-202ENST00000594297 RSF1Q96T23 1441 aaPredicted RBP29.2■■■□□ 2.26
FOXA3-202ENST00000594297 RIMBP3CA6NJZ7 1639 aa29.16■■■□□ 2.26
FOXA3-202ENST00000594297 RIMBP3BA6NNM3 1639 aa29.16■■■□□ 2.26
FOXA3-202ENST00000594297 RIMBP3Q9UFD9 1639 aa29.16■■■□□ 2.26
FOXA3-202ENST00000594297 ZNF608Q9ULD9 1512 aaPredicted RBP29.04■■■□□ 2.24
FOXA3-202ENST00000594297 IFT140Q96RY7 1462 aa29■■■□□ 2.23
FOXA3-202ENST00000594297 ARHGEF11O15085 1522 aa28.99■■■□□ 2.23
FOXA3-202ENST00000594297 EIF4G3O43432 1585 aaKnown RBP28.93■■■□□ 2.22
FOXA3-202ENST00000594297 TOPBP1Q92547 1522 aa28.92■■■□□ 2.22
FOXA3-202ENST00000594297 CCDC88BA6NC98 1476 aa28.89■■■□□ 2.22
FOXA3-202ENST00000594297 CHD1O14646 1710 aa28.82■■■□□ 2.2
FOXA3-202ENST00000594297 DNMBPQ6XZF7 1577 aa28.8■■■□□ 2.2
FOXA3-202ENST00000594297 TARBP1Q13395 1621 aaKnown RBP28.75■■■□□ 2.19
FOXA3-202ENST00000594297 ABCC8Q09428 1581 aa28.75■■■□□ 2.19
FOXA3-202ENST00000594297 ARAP1Q96P48 1450 aa28.68■■■□□ 2.18
FOXA3-202ENST00000594297 AQRO60306 1485 aaKnown RBP eCLIP28.66■■■□□ 2.181e-6■■■□□ 16.3
FOXA3-202ENST00000594297 CYB5RLQ6IPT4 315 aa28.65■■■□□ 2.18
FOXA3-202ENST00000594297 POLA1P09884 1462 aaPredicted RBP28.6■■■□□ 2.17
FOXA3-202ENST00000594297 TRHP20396 242 aaPredicted RBP28.49■■■□□ 2.15
FOXA3-202ENST00000594297 FBLN2P98095 1184 aa28.49■■■□□ 2.15
FOXA3-202ENST00000594297 RAD54L2Q9Y4B4 1467 aa28.48■■■□□ 2.15
FOXA3-202ENST00000594297 CLASP1Q7Z460 1538 aa28.44■■■□□ 2.14
FOXA3-202ENST00000594297 SNAPC4Q5SXM2 1469 aa28.42■■■□□ 2.14
FOXA3-202ENST00000594297 WDR97A6NE52 1622 aa28.4■■■□□ 2.14
FOXA3-202ENST00000594297 TDRD9Q8NDG6 1382 aaKnown RBP28.39■■■□□ 2.14
FOXA3-202ENST00000594297 SOGA1O94964 1423 aa28.37■■■□□ 2.13
FOXA3-202ENST00000594297 FGD5Q6ZNL6 1462 aa28.35■■■□□ 2.13
FOXA3-202ENST00000594297 SYNJ1O43426 1573 aa28.34■■■□□ 2.13
FOXA3-202ENST00000594297 MAGI1Q96QZ7 1491 aaPredicted RBP28.3■■■□□ 2.12
FOXA3-202ENST00000594297 CUX1P39880 1505 aa28.27■■■□□ 2.12
FOXA3-202ENST00000594297 GRIN2BQ13224 1484 aa28.23■■■□□ 2.11
FOXA3-202ENST00000594297 PBRM1Q86U86 1689 aa28.22■■■□□ 2.11
FOXA3-202ENST00000594297 SYNJ2O15056 1496 aa28.21■■■□□ 2.11
FOXA3-202ENST00000594297 CHMP7Q8WUX9 453 aaPredicted RBP28.19■■■□□ 2.1
FOXA3-202ENST00000594297 GAPVD1Q14C86 1478 aa28.09■■■□□ 2.09
FOXA3-202ENST00000594297 ABCA5Q8WWZ7 1642 aa28.07■■■□□ 2.08
FOXA3-202ENST00000594297 AEBP2Q6ZN18 517 aaPredicted RBP27.99■■■□□ 2.07
FOXA3-202ENST00000594297 ABCA10Q8WWZ4 1543 aa27.98■■■□□ 2.07
FOXA3-202ENST00000594297 ERCC6L2Q5T890 1561 aa27.97■■■□□ 2.07
FOXA3-202ENST00000594297 GRIN2AQ12879 1464 aa27.9■■■□□ 2.06
FOXA3-202ENST00000594297 ADAMTS12P58397 1594 aa27.9■■■□□ 2.06
FOXA3-202ENST00000594297 CEP170Q5SW79 1584 aa27.87■■■□□ 2.05
FOXA3-202ENST00000594297 NUP160Q12769 1436 aa27.82■■■□□ 2.04
FOXA3-202ENST00000594297 SHROOM2Q13796 1616 aa27.81■■■□□ 2.04
FOXA3-202ENST00000594297 BIVM-ERCC5R4GMW8 1640 aa27.74■■■□□ 2.03
FOXA3-202ENST00000594297 KIF13AQ9H1H9 1805 aa27.72■■■□□ 2.03
FOXA3-202ENST00000594297 WRNQ14191 1432 aaPredicted RBP eCLIP27.72■■■□□ 2.03
FOXA3-202ENST00000594297 TOP2BQ02880 1626 aa27.69■■■□□ 2.02
FOXA3-202ENST00000594297 FHAD1B1AJZ9 1412 aa27.67■■■□□ 2.02
FOXA3-202ENST00000594297 ERICH3Q5RHP9 1530 aa27.63■■■□□ 2.01
FOXA3-202ENST00000594297 PRG4Q92954 1404 aaPredicted RBP27.54■■■□□ 2
FOXA3-202ENST00000594297 RUSC2Q8N2Y8 1516 aa27.53■■■□□ 2
FOXA3-202ENST00000594297 SUPT5HO00267 1087 aaKnown RBP27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms