RNA–Protein interactions for RNA: ENST00000524131.5

MEG3-223, Transcript of maternally expressed 3, humanhuman

TSL 5 BASIC

Gene MEG3, Length 721 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-223ENST00000524131 NISCHQ9Y2I1 1504 aa28.58■■■□□ 2.17
MEG3-223ENST00000524131 ABCC9O60706 1549 aa25.91■■□□□ 1.74
MEG3-223ENST00000524131 CCDC180Q9P1Z9 1646 aa25.89■■□□□ 1.74
MEG3-223ENST00000524131 RB1CC1Q8TDY2 1594 aa24.64■■□□□ 1.54
MEG3-223ENST00000524131 DNAJC5BQ9UF47 199 aa24.45■■□□□ 1.5
MEG3-223ENST00000524131 NACADO15069 1562 aa24.41■■□□□ 1.5
MEG3-223ENST00000524131 UNC13AQ9UPW8 1703 aa24.3■■□□□ 1.48
MEG3-223ENST00000524131 MYO15BQ96JP2 1530 aa24.03■■□□□ 1.44
MEG3-223ENST00000524131 BICRAQ9NZM4 1560 aa24■■□□□ 1.43
MEG3-223ENST00000524131 PABPN1Q86U42 306 aaKnown RBP eCLIP23.96■■□□□ 1.43
MEG3-223ENST00000524131 DCAF8L2P0C7V8 631 aa23.92■■□□□ 1.42
MEG3-223ENST00000524131 ZCCHC6Q5VYS8 1495 aaKnown RBP23.68■■□□□ 1.38
MEG3-223ENST00000524131 DCAF1Q9Y4B6 1507 aa23.64■■□□□ 1.37
MEG3-223ENST00000524131 SHROOM4Q9ULL8 1493 aa23.62■■□□□ 1.37
MEG3-223ENST00000524131 CC2D2AQ9P2K1 1620 aa23.5■■□□□ 1.35
MEG3-223ENST00000524131 SCRIBQ14160 1630 aa23.48■■□□□ 1.35
MEG3-223ENST00000524131 EIF4G1Q04637 1599 aaKnown RBP23.39■■□□□ 1.33
MEG3-223ENST00000524131 CECR2Q9BXF3 1484 aa23.36■■□□□ 1.33
MEG3-223ENST00000524131 DNAJC5Q9H3Z4 198 aa22.59■■□□□ 1.21
MEG3-223ENST00000524131 NCAPD3P42695 1498 aa22.48■■□□□ 1.19
MEG3-223ENST00000524131 CUX2O14529 1486 aa22.47■■□□□ 1.19
MEG3-223ENST00000524131 SMARCA4P51532 1647 aa22.41■■□□□ 1.18
MEG3-223ENST00000524131 HMGXB3Q12766 1538 aa22.4■■□□□ 1.18
MEG3-223ENST00000524131 ATAD2BQ9ULI0 1458 aa22.4■■□□□ 1.18
MEG3-223ENST00000524131 SMARCA2P51531 1590 aa22.36■■□□□ 1.17
MEG3-223ENST00000524131 ERCC6Q03468 1493 aa22.35■■□□□ 1.17
MEG3-223ENST00000524131 NESP48681 1621 aa22.24■■□□□ 1.15
MEG3-223ENST00000524131 PEG3Q9GZU2 1588 aa22.21■■□□□ 1.15
MEG3-223ENST00000524131 BAZ1AQ9NRL2 1556 aaPredicted RBP22.21■■□□□ 1.15
MEG3-223ENST00000524131 THOC2Q8NI27 1593 aaKnown RBP22.19■■□□□ 1.14
MEG3-223ENST00000524131 BAZ1BQ9UIG0 1483 aaKnown RBP22.16■■□□□ 1.14
MEG3-223ENST00000524131 LAMC3Q9Y6N6 1575 aa22.1■■□□□ 1.13
MEG3-223ENST00000524131 KIF21AQ7Z4S6 1674 aa22.08■■□□□ 1.13
MEG3-223ENST00000524131 MROH2BQ7Z745 1585 aa22.02■■□□□ 1.12
MEG3-223ENST00000524131 PDS5BQ9NTI5 1447 aa21.84■■□□□ 1.09
MEG3-223ENST00000524131 WIZO95785 1651 aa21.8■■□□□ 1.08
MEG3-223ENST00000524131 WDR62O43379 1518 aa21.76■■□□□ 1.07
MEG3-223ENST00000524131 CADPSQ9ULU8 1353 aa21.74■■□□□ 1.07
MEG3-223ENST00000524131 MRC2Q9UBG0 1479 aa21.74■■□□□ 1.07
MEG3-223ENST00000524131 CEP164Q9UPV0 1460 aa21.6■■□□□ 1.05
MEG3-223ENST00000524131 FANCD2Q9BXW9 1451 aa21.55■■□□□ 1.04
MEG3-223ENST00000524131 PRDM2Q13029 1718 aa21.52■■□□□ 1.04
MEG3-223ENST00000524131 CFTRP13569 1480 aa21.51■■□□□ 1.03
MEG3-223ENST00000524131 TOP2AP11388 1531 aaKnown RBP21.48■■□□□ 1.03
MEG3-223ENST00000524131 TRIM41Q8WV44 630 aa21.44■■□□□ 1.02
MEG3-223ENST00000524131 URB2Q14146 1524 aaKnown RBP21.43■■□□□ 1.02
MEG3-223ENST00000524131 RSF1Q96T23 1441 aaPredicted RBP21.42■■□□□ 1.02
MEG3-223ENST00000524131 OSCARQ8IYS5 282 aa21.23■□□□□ 0.99
MEG3-223ENST00000524131 RIMBP3CA6NJZ7 1639 aa21.22■□□□□ 0.99
MEG3-223ENST00000524131 RIMBP3BA6NNM3 1639 aa21.22■□□□□ 0.99
MEG3-223ENST00000524131 RIMBP3Q9UFD9 1639 aa21.22■□□□□ 0.99
MEG3-223ENST00000524131 ZNF608Q9ULD9 1512 aaPredicted RBP21.18■□□□□ 0.98
MEG3-223ENST00000524131 CCDC88BA6NC98 1476 aa21.16■□□□□ 0.98
MEG3-223ENST00000524131 IFT140Q96RY7 1462 aa21.16■□□□□ 0.98
MEG3-223ENST00000524131 EIF4G3O43432 1585 aaKnown RBP21.15■□□□□ 0.98
MEG3-223ENST00000524131 TOPBP1Q92547 1522 aa21.14■□□□□ 0.98
MEG3-223ENST00000524131 DNMBPQ6XZF7 1577 aa21.09■□□□□ 0.97
MEG3-223ENST00000524131 ARHGEF11O15085 1522 aa21.09■□□□□ 0.97
MEG3-223ENST00000524131 CHD1O14646 1710 aa21.08■□□□□ 0.97
MEG3-223ENST00000524131 TARBP1Q13395 1621 aaKnown RBP21.06■□□□□ 0.96
MEG3-223ENST00000524131 ABCC8Q09428 1581 aa21.03■□□□□ 0.96
MEG3-223ENST00000524131 POLA1P09884 1462 aaPredicted RBP20.91■□□□□ 0.94
MEG3-223ENST00000524131 AQRO60306 1485 aaKnown RBP eCLIP20.89■□□□□ 0.94
MEG3-223ENST00000524131 ARAP1Q96P48 1450 aa20.86■□□□□ 0.93
MEG3-223ENST00000524131 WDR97A6NE52 1622 aa20.82■□□□□ 0.92
MEG3-223ENST00000524131 RAD54L2Q9Y4B4 1467 aa20.8■□□□□ 0.92
MEG3-223ENST00000524131 CLASP1Q7Z460 1538 aa20.78■□□□□ 0.92
MEG3-223ENST00000524131 CYB5RLQ6IPT4 315 aa20.74■□□□□ 0.91
MEG3-223ENST00000524131 FGD5Q6ZNL6 1462 aa20.74■□□□□ 0.91
MEG3-223ENST00000524131 SNAPC4Q5SXM2 1469 aa20.73■□□□□ 0.91
MEG3-223ENST00000524131 CUX1P39880 1505 aa20.72■□□□□ 0.91
MEG3-223ENST00000524131 SOGA1O94964 1423 aa20.71■□□□□ 0.91
MEG3-223ENST00000524131 PBRM1Q86U86 1689 aa20.7■□□□□ 0.91
MEG3-223ENST00000524131 TDRD9Q8NDG6 1382 aaKnown RBP20.69■□□□□ 0.9
MEG3-223ENST00000524131 SYNJ1O43426 1573 aa20.68■□□□□ 0.9
MEG3-223ENST00000524131 MAGI1Q96QZ7 1491 aaPredicted RBP20.68■□□□□ 0.9
MEG3-223ENST00000524131 FBLN2P98095 1184 aa20.66■□□□□ 0.9
MEG3-223ENST00000524131 GRIN2BQ13224 1484 aa20.62■□□□□ 0.89
MEG3-223ENST00000524131 SYNJ2O15056 1496 aa20.59■□□□□ 0.89
MEG3-223ENST00000524131 ABCA5Q8WWZ7 1642 aa20.59■□□□□ 0.89
MEG3-223ENST00000524131 TRHP20396 242 aaPredicted RBP20.55■□□□□ 0.88
MEG3-223ENST00000524131 GAPVD1Q14C86 1478 aa20.51■□□□□ 0.87
MEG3-223ENST00000524131 ABCA10Q8WWZ4 1543 aa20.51■□□□□ 0.87
MEG3-223ENST00000524131 CHMP7Q8WUX9 453 aaPredicted RBP20.5■□□□□ 0.87
MEG3-223ENST00000524131 ADAMTS12P58397 1594 aa20.43■□□□□ 0.86
MEG3-223ENST00000524131 BIVM-ERCC5R4GMW8 1640 aa20.42■□□□□ 0.86
MEG3-223ENST00000524131 ERCC6L2Q5T890 1561 aa20.41■□□□□ 0.86
MEG3-223ENST00000524131 CEP170Q5SW79 1584 aa20.38■□□□□ 0.85
MEG3-223ENST00000524131 GRIN2AQ12879 1464 aa20.38■□□□□ 0.85
MEG3-223ENST00000524131 SHROOM2Q13796 1616 aa20.38■□□□□ 0.85
MEG3-223ENST00000524131 TOP2BQ02880 1626 aa20.35■□□□□ 0.85
MEG3-223ENST00000524131 NUP160Q12769 1436 aa20.33■□□□□ 0.84
MEG3-223ENST00000524131 WRNQ14191 1432 aaPredicted RBP eCLIP20.28■□□□□ 0.84
MEG3-223ENST00000524131 KIF13AQ9H1H9 1805 aa20.28■□□□□ 0.84
MEG3-223ENST00000524131 SUPT5HO00267 1087 aaKnown RBP20.27■□□□□ 0.84
MEG3-223ENST00000524131 ERICH3Q5RHP9 1530 aa20.26■□□□□ 0.83
MEG3-223ENST00000524131 FHAD1B1AJZ9 1412 aa20.23■□□□□ 0.83
MEG3-223ENST00000524131 RUSC2Q8N2Y8 1516 aa20.17■□□□□ 0.82
MEG3-223ENST00000524131 AEBP2Q6ZN18 517 aaPredicted RBP20.1■□□□□ 0.81
MEG3-223ENST00000524131 PRG4Q92954 1404 aaPredicted RBP20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms