Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.68■■□□□ 1.06
CLDN20P56880 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.68■■□□□ 1.06
CLDN20P56880 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN20P56880 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN20P56880 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.68■■□□□ 1.06
CLDN20P56880 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.68■■□□□ 1.06
CLDN20P56880 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.68■■□□□ 1.06
CLDN20P56880 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN20P56880 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN20P56880 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN20P56880 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN20P56880 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN20P56880 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.67■■□□□ 1.06
CLDN20P56880 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN20P56880 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN20P56880 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN20P56880 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN20P56880 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN20P56880 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN20P56880 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
CLDN20P56880 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN20P56880 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN20P56880 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.66■■□□□ 1.06
CLDN20P56880 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CLDN20P56880 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN20P56880 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN20P56880 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN20P56880 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN20P56880 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN20P56880 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN20P56880 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN20P56880 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.65■■□□□ 1.06
CLDN20P56880 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN20P56880 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLDN20P56880 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLDN20P56880 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CLDN20P56880 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.64■■□□□ 1.05
CLDN20P56880 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.64■■□□□ 1.05
CLDN20P56880 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.64■■□□□ 1.05
CLDN20P56880 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLDN20P56880 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.64■■□□□ 1.05
CLDN20P56880 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLDN20P56880 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.63■■□□□ 1.05
CLDN20P56880 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN20P56880 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.63■■□□□ 1.05
CLDN20P56880 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.63■■□□□ 1.05
CLDN20P56880 ERN1-208ENST00000606895 2068 ntBASIC21.62■■□□□ 1.05
CLDN20P56880 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN20P56880 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN20P56880 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.62■■□□□ 1.05
CLDN20P56880 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CLDN20P56880 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN20P56880 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.62■■□□□ 1.05
CLDN20P56880 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN20P56880 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN20P56880 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN20P56880 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.61■■□□□ 1.05
CLDN20P56880 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.61■■□□□ 1.05
CLDN20P56880 BHLHE23-202ENST00000612929 1109 ntBASIC21.61■■□□□ 1.05
CLDN20P56880 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CLDN20P56880 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN20P56880 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN20P56880 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN20P56880 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CLDN20P56880 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN20P56880 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN20P56880 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.6■■□□□ 1.05
CLDN20P56880 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
CLDN20P56880 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.6■■□□□ 1.05
CLDN20P56880 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN20P56880 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN20P56880 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN20P56880 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN20P56880 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN20P56880 AC139795.1-202ENST00000500444 432 ntBASIC21.59■■□□□ 1.05
CLDN20P56880 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN20P56880 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.59■■□□□ 1.05
CLDN20P56880 DUSP8P4-201ENST00000399538 1761 ntBASIC21.59■■□□□ 1.05
CLDN20P56880 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CLDN20P56880 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CLDN20P56880 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CLDN20P56880 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.58■■□□□ 1.05
CLDN20P56880 RPS2P7-201ENST00000447334 885 ntBASIC21.58■■□□□ 1.05
CLDN20P56880 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.58■■□□□ 1.05
CLDN20P56880 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CLDN20P56880 AC092803.2-201ENST00000564287 1899 ntBASIC21.58■■□□□ 1.04
CLDN20P56880 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLDN20P56880 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLDN20P56880 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.57■■□□□ 1.04
CLDN20P56880 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLDN20P56880 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLDN20P56880 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLDN20P56880 AC010980.1-201ENST00000587192 1142 ntBASIC21.57■■□□□ 1.04
CLDN20P56880 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLDN20P56880 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.57■■□□□ 1.04
CLDN20P56880 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.56■■□□□ 1.04
CLDN20P56880 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CLDN20P56880 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLDN20P56880 AC087393.1-201ENST00000582896 145 ntBASIC21.56■■□□□ 1.04
CLDN20P56880 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms