Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDX1P52945 KRT18P10-201ENST00000388836 1287 ntBASIC23.1■■□□□ 1.29
PDX1P52945 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.1■■□□□ 1.29
PDX1P52945 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.1■■□□□ 1.29
PDX1P52945 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
PDX1P52945 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDX1P52945 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.09■■□□□ 1.29
PDX1P52945 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
PDX1P52945 UNC93B8-201ENST00000511903 705 ntBASIC23.09■■□□□ 1.29
PDX1P52945 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.09■■□□□ 1.29
PDX1P52945 MIR4787-201ENST00000607364 84 ntBASIC23.09■■□□□ 1.29
PDX1P52945 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDX1P52945 KRT18P24-201ENST00000344739 1156 ntBASIC23.08■■□□□ 1.29
PDX1P52945 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDX1P52945 BX664725.1-201ENST00000438252 379 ntBASIC23.08■■□□□ 1.29
PDX1P52945 KRT125P-201ENST00000546827 989 ntBASIC23.08■■□□□ 1.29
PDX1P52945 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PDX1P52945 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
PDX1P52945 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
PDX1P52945 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
PDX1P52945 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDX1P52945 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDX1P52945 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PDX1P52945 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDX1P52945 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.07■■□□□ 1.28
PDX1P52945 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.07■■□□□ 1.28
PDX1P52945 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.07■■□□□ 1.28
PDX1P52945 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.07■■□□□ 1.28
PDX1P52945 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDX1P52945 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.07■■□□□ 1.28
PDX1P52945 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.06■■□□□ 1.28
PDX1P52945 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDX1P52945 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PDX1P52945 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.06■■□□□ 1.28
PDX1P52945 AC142472.1-201ENST00000612013 1741 ntBASIC23.05■■□□□ 1.28
PDX1P52945 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDX1P52945 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.05■■□□□ 1.28
PDX1P52945 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.05■■□□□ 1.28
PDX1P52945 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.05■■□□□ 1.28
PDX1P52945 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PDX1P52945 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDX1P52945 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.04■■□□□ 1.28
PDX1P52945 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PDX1P52945 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.04■■□□□ 1.28
PDX1P52945 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDX1P52945 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDX1P52945 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDX1P52945 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDX1P52945 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDX1P52945 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.03■■□□□ 1.28
PDX1P52945 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PDX1P52945 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PDX1P52945 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDX1P52945 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDX1P52945 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDX1P52945 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDX1P52945 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.02■■□□□ 1.28
PDX1P52945 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PDX1P52945 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.02■■□□□ 1.28
PDX1P52945 AC120024.1-201ENST00000562672 995 ntBASIC23.02■■□□□ 1.28
PDX1P52945 AC137630.3-201ENST00000607245 391 ntBASIC23.02■■□□□ 1.28
PDX1P52945 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.02■■□□□ 1.28
PDX1P52945 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
PDX1P52945 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.02■■□□□ 1.28
PDX1P52945 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PDX1P52945 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDX1P52945 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.01■■□□□ 1.27
PDX1P52945 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
PDX1P52945 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PDX1P52945 AC008406.3-201ENST00000620001 1374 ntBASIC23.01■■□□□ 1.27
PDX1P52945 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDX1P52945 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
PDX1P52945 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23■■□□□ 1.27
PDX1P52945 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23■■□□□ 1.27
PDX1P52945 KRT16P3-201ENST00000439127 1283 ntBASIC23■■□□□ 1.27
PDX1P52945 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23■■□□□ 1.27
PDX1P52945 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23■■□□□ 1.27
PDX1P52945 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23■■□□□ 1.27
PDX1P52945 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PDX1P52945 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDX1P52945 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.99■■□□□ 1.27
PDX1P52945 AP004609.3-201ENST00000610705 1884 ntBASIC22.99■■□□□ 1.27
PDX1P52945 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDX1P52945 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDX1P52945 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.99■■□□□ 1.27
PDX1P52945 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDX1P52945 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.99■■□□□ 1.27
PDX1P52945 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDX1P52945 AC021242.3-201ENST00000607598 1377 ntBASIC22.99■■□□□ 1.27
PDX1P52945 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDX1P52945 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.99■■□□□ 1.27
PDX1P52945 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.99■■□□□ 1.27
PDX1P52945 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDX1P52945 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.98■■□□□ 1.27
PDX1P52945 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDX1P52945 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDX1P52945 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
PDX1P52945 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
PDX1P52945 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDX1P52945 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms