Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.67■■□□□ 1.86
CPT1AP50416 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CPT1AP50416 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.66■■□□□ 1.86
CPT1AP50416 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.66■■□□□ 1.86
CPT1AP50416 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.66■■□□□ 1.86
CPT1AP50416 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CPT1AP50416 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CPT1AP50416 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
CPT1AP50416 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CPT1AP50416 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CPT1AP50416 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC26.63■■□□□ 1.85
CPT1AP50416 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.63■■□□□ 1.85
CPT1AP50416 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CPT1AP50416 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
CPT1AP50416 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC26.62■■□□□ 1.85
CPT1AP50416 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.62■■□□□ 1.85
CPT1AP50416 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.62■■□□□ 1.85
CPT1AP50416 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
CPT1AP50416 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.61■■□□□ 1.85
CPT1AP50416 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.61■■□□□ 1.85
CPT1AP50416 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CPT1AP50416 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CPT1AP50416 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.61■■□□□ 1.85
CPT1AP50416 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
CPT1AP50416 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CPT1AP50416 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CPT1AP50416 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
CPT1AP50416 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CPT1AP50416 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CPT1AP50416 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.59■■□□□ 1.85
CPT1AP50416 AC010997.5-201ENST00000609182 354 ntBASIC26.59■■□□□ 1.85
CPT1AP50416 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.59■■□□□ 1.85
CPT1AP50416 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CPT1AP50416 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
CPT1AP50416 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.57■■□□□ 1.84
CPT1AP50416 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CPT1AP50416 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.57■■□□□ 1.84
CPT1AP50416 MTDHP2-201ENST00000601468 714 ntBASIC26.57■■□□□ 1.84
CPT1AP50416 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
CPT1AP50416 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.56■■□□□ 1.84
CPT1AP50416 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.56■■□□□ 1.84
CPT1AP50416 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CPT1AP50416 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.56■■□□□ 1.84
CPT1AP50416 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.56■■□□□ 1.84
CPT1AP50416 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.56■■□□□ 1.84
CPT1AP50416 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CPT1AP50416 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.55■■□□□ 1.84
CPT1AP50416 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CPT1AP50416 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.55■■□□□ 1.84
CPT1AP50416 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CPT1AP50416 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.55■■□□□ 1.84
CPT1AP50416 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.55■■□□□ 1.84
CPT1AP50416 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.55■■□□□ 1.84
CPT1AP50416 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.55■■□□□ 1.84
CPT1AP50416 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.55■■□□□ 1.84
CPT1AP50416 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CPT1AP50416 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
CPT1AP50416 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.54■■□□□ 1.84
CPT1AP50416 AC131281.2-201ENST00000520478 145 ntBASIC26.54■■□□□ 1.84
CPT1AP50416 MIR6724-1-201ENST00000616420 92 ntBASIC26.54■■□□□ 1.84
CPT1AP50416 MIR6724-2-201ENST00000616483 92 ntBASIC26.54■■□□□ 1.84
CPT1AP50416 MIR6724-4-201ENST00000617390 92 ntBASIC26.54■■□□□ 1.84
CPT1AP50416 MIR6724-3-201ENST00000622482 92 ntBASIC26.54■■□□□ 1.84
CPT1AP50416 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CPT1AP50416 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.53■■□□□ 1.84
CPT1AP50416 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
CPT1AP50416 AL117332.1-201ENST00000622628 974 ntBASIC26.53■■□□□ 1.84
CPT1AP50416 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CPT1AP50416 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CPT1AP50416 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CPT1AP50416 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.53■■□□□ 1.84
CPT1AP50416 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.52■■□□□ 1.84
CPT1AP50416 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.52■■□□□ 1.84
CPT1AP50416 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
CPT1AP50416 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.52■■□□□ 1.84
CPT1AP50416 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
CPT1AP50416 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.52■■□□□ 1.84
CPT1AP50416 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CPT1AP50416 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
CPT1AP50416 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
CPT1AP50416 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.51■■□□□ 1.83
CPT1AP50416 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CPT1AP50416 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.51■■□□□ 1.83
CPT1AP50416 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CPT1AP50416 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.51■■□□□ 1.83
CPT1AP50416 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CPT1AP50416 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.51■■□□□ 1.83
CPT1AP50416 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.5■■□□□ 1.83
CPT1AP50416 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.5■■□□□ 1.83
CPT1AP50416 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.5■■□□□ 1.83
CPT1AP50416 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.5■■□□□ 1.83
CPT1AP50416 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CPT1AP50416 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CPT1AP50416 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CPT1AP50416 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
CPT1AP50416 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.49■■□□□ 1.83
CPT1AP50416 MIR3621-201ENST00000580529 85 ntBASIC26.49■■□□□ 1.83
CPT1AP50416 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CPT1AP50416 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CPT1AP50416 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms