Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC29.73■■■□□ 2.35
KCNA3P22001 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
KCNA3P22001 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
KCNA3P22001 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
KCNA3P22001 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
KCNA3P22001 MIR5787-201ENST00000611784 55 ntBASIC29.73■■■□□ 2.35
KCNA3P22001 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC29.73■■■□□ 2.35
KCNA3P22001 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
KCNA3P22001 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
KCNA3P22001 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC29.72■■■□□ 2.35
KCNA3P22001 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC29.72■■■□□ 2.35
KCNA3P22001 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC29.72■■■□□ 2.35
KCNA3P22001 PROC-203ENST00000409048 1586 ntTSL 5 BASIC29.72■■■□□ 2.35
KCNA3P22001 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
KCNA3P22001 LGR4-203ENST00000480977 492 ntTSL 2 BASIC29.71■■■□□ 2.35
KCNA3P22001 GAK-223ENST00000628912 497 ntTSL 5 BASIC29.71■■■□□ 2.35
KCNA3P22001 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
KCNA3P22001 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
KCNA3P22001 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC29.7■■■□□ 2.35
KCNA3P22001 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
KCNA3P22001 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
KCNA3P22001 CD72-202ENST00000378430 585 ntTSL 3 BASIC29.7■■■□□ 2.35
KCNA3P22001 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
KCNA3P22001 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
KCNA3P22001 UNC93B3-201ENST00000308076 687 ntBASIC29.69■■■□□ 2.34
KCNA3P22001 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
KCNA3P22001 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC29.69■■■□□ 2.34
KCNA3P22001 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
KCNA3P22001 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC29.69■■■□□ 2.34
KCNA3P22001 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
KCNA3P22001 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC29.68■■■□□ 2.34
KCNA3P22001 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC29.68■■■□□ 2.34
KCNA3P22001 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC29.68■■■□□ 2.34
KCNA3P22001 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
KCNA3P22001 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC29.68■■■□□ 2.34
KCNA3P22001 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
KCNA3P22001 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC29.67■■■□□ 2.34
KCNA3P22001 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC29.67■■■□□ 2.34
KCNA3P22001 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC29.67■■■□□ 2.34
KCNA3P22001 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC29.67■■■□□ 2.34
KCNA3P22001 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC29.67■■■□□ 2.34
KCNA3P22001 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
KCNA3P22001 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
KCNA3P22001 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
KCNA3P22001 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
KCNA3P22001 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
KCNA3P22001 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
KCNA3P22001 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC29.66■■■□□ 2.34
KCNA3P22001 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC29.66■■■□□ 2.34
KCNA3P22001 AC011551.1-201ENST00000614101 683 ntBASIC29.66■■■□□ 2.34
KCNA3P22001 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC29.65■■■□□ 2.34
KCNA3P22001 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC29.65■■■□□ 2.34
KCNA3P22001 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
KCNA3P22001 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC29.64■■■□□ 2.34
KCNA3P22001 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC29.64■■■□□ 2.34
KCNA3P22001 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
KCNA3P22001 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.33
KCNA3P22001 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
KCNA3P22001 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC29.63■■■□□ 2.33
KCNA3P22001 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC29.63■■■□□ 2.33
KCNA3P22001 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC29.63■■■□□ 2.33
KCNA3P22001 AF131216.4-201ENST00000638924 1588 ntBASIC29.63■■■□□ 2.33
KCNA3P22001 BX255925.1-201ENST00000566954 1854 ntBASIC29.63■■■□□ 2.33
KCNA3P22001 AL136162.1-201ENST00000607711 1078 ntBASIC29.62■■■□□ 2.33
KCNA3P22001 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC29.62■■■□□ 2.33
KCNA3P22001 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
KCNA3P22001 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
KCNA3P22001 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC29.61■■■□□ 2.33
KCNA3P22001 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
KCNA3P22001 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
KCNA3P22001 HYI-206ENST00000372434 1025 ntTSL 5 BASIC29.6■■■□□ 2.33
KCNA3P22001 TFPT-201ENST00000391757 774 ntTSL 5 BASIC29.6■■■□□ 2.33
KCNA3P22001 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
KCNA3P22001 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
KCNA3P22001 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC29.6■■■□□ 2.33
KCNA3P22001 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC29.6■■■□□ 2.33
KCNA3P22001 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
KCNA3P22001 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
KCNA3P22001 CLTA-206ENST00000466396 695 ntTSL 2 BASIC29.58■■■□□ 2.33
KCNA3P22001 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC29.57■■■□□ 2.32
KCNA3P22001 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC29.57■■■□□ 2.32
KCNA3P22001 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
KCNA3P22001 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
KCNA3P22001 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
KCNA3P22001 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC29.57■■■□□ 2.32
KCNA3P22001 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
KCNA3P22001 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC29.57■■■□□ 2.32
KCNA3P22001 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
KCNA3P22001 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
KCNA3P22001 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
KCNA3P22001 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
KCNA3P22001 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC29.56■■■□□ 2.32
KCNA3P22001 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
KCNA3P22001 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
KCNA3P22001 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC29.56■■■□□ 2.32
KCNA3P22001 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
KCNA3P22001 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
KCNA3P22001 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC29.55■■■□□ 2.32
KCNA3P22001 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
KCNA3P22001 EDA-201ENST00000338901 1233 ntBASIC29.55■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms