Protein–RNA interactions for Protein: P20340

RAB6A, Ras-related protein Rab-6A, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6AP20340 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.3■□□□□ 0.84
RAB6AP20340 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RAB6AP20340 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RAB6AP20340 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAB6AP20340 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB6AP20340 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAB6AP20340 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAB6AP20340 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAB6AP20340 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB6AP20340 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB6AP20340 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAB6AP20340 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB6AP20340 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB6AP20340 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAB6AP20340 HLA-V-202ENST00000446817 847 ntBASIC20.28■□□□□ 0.84
RAB6AP20340 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB6AP20340 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAB6AP20340 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.28■□□□□ 0.84
RAB6AP20340 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB6AP20340 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB6AP20340 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB6AP20340 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RAB6AP20340 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAB6AP20340 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAB6AP20340 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RAB6AP20340 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAB6AP20340 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB6AP20340 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RAB6AP20340 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RAB6AP20340 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB6AP20340 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB6AP20340 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.27■□□□□ 0.84
RAB6AP20340 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAB6AP20340 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.27■□□□□ 0.84
RAB6AP20340 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RAB6AP20340 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RAB6AP20340 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAB6AP20340 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB6AP20340 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB6AP20340 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAB6AP20340 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.26■□□□□ 0.83
RAB6AP20340 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.26■□□□□ 0.83
RAB6AP20340 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAB6AP20340 AC126177.7-201ENST00000547904 679 ntBASIC20.26■□□□□ 0.83
RAB6AP20340 DUX4L11-201ENST00000611504 1267 ntBASIC20.26■□□□□ 0.83
RAB6AP20340 DUX4L12-201ENST00000614593 1267 ntBASIC20.26■□□□□ 0.83
RAB6AP20340 DUX4L14-201ENST00000621227 1267 ntBASIC20.26■□□□□ 0.83
RAB6AP20340 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RAB6AP20340 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.26■□□□□ 0.83
RAB6AP20340 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAB6AP20340 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAB6AP20340 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.26■□□□□ 0.83
RAB6AP20340 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB6AP20340 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.25■□□□□ 0.83
RAB6AP20340 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB6AP20340 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.25■□□□□ 0.83
RAB6AP20340 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.25■□□□□ 0.83
RAB6AP20340 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
RAB6AP20340 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAB6AP20340 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB6AP20340 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAB6AP20340 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB6AP20340 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB6AP20340 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.24■□□□□ 0.83
RAB6AP20340 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB6AP20340 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB6AP20340 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB6AP20340 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB6AP20340 AC133561.1-201ENST00000568600 2415 ntBASIC20.24■□□□□ 0.83
RAB6AP20340 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.24■□□□□ 0.83
RAB6AP20340 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.23■□□□□ 0.83
RAB6AP20340 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB6AP20340 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB6AP20340 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.23■□□□□ 0.83
RAB6AP20340 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.23■□□□□ 0.83
RAB6AP20340 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.23■□□□□ 0.83
RAB6AP20340 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAB6AP20340 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RAB6AP20340 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.23■□□□□ 0.83
RAB6AP20340 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB6AP20340 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RAB6AP20340 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB6AP20340 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RAB6AP20340 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.22■□□□□ 0.83
RAB6AP20340 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.22■□□□□ 0.83
RAB6AP20340 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB6AP20340 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB6AP20340 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB6AP20340 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
RAB6AP20340 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB6AP20340 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB6AP20340 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB6AP20340 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB6AP20340 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB6AP20340 AC068473.5-201ENST00000616428 2072 ntBASIC20.21■□□□□ 0.83
RAB6AP20340 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
RAB6AP20340 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB6AP20340 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB6AP20340 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
RAB6AP20340 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms