Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM3O75382 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM3O75382 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.99■■□□□ 1.11
TRIM3O75382 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM3O75382 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM3O75382 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM3O75382 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.99■■□□□ 1.11
TRIM3O75382 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.98■■□□□ 1.11
TRIM3O75382 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM3O75382 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM3O75382 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.98■■□□□ 1.11
TRIM3O75382 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM3O75382 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
TRIM3O75382 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.98■■□□□ 1.11
TRIM3O75382 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM3O75382 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM3O75382 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.98■■□□□ 1.11
TRIM3O75382 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM3O75382 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM3O75382 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.97■■□□□ 1.11
TRIM3O75382 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM3O75382 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM3O75382 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
TRIM3O75382 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM3O75382 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM3O75382 AC092803.2-201ENST00000564287 1899 ntBASIC21.96■■□□□ 1.11
TRIM3O75382 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM3O75382 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.96■■□□□ 1.11
TRIM3O75382 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.96■■□□□ 1.11
TRIM3O75382 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM3O75382 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM3O75382 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM3O75382 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM3O75382 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM3O75382 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM3O75382 AC139795.1-202ENST00000500444 432 ntBASIC21.95■■□□□ 1.1
TRIM3O75382 BHLHE23-202ENST00000612929 1109 ntBASIC21.95■■□□□ 1.1
TRIM3O75382 AC074183.2-201ENST00000623112 922 ntBASIC21.95■■□□□ 1.1
TRIM3O75382 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM3O75382 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.95■■□□□ 1.1
TRIM3O75382 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.95■■□□□ 1.1
TRIM3O75382 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM3O75382 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
TRIM3O75382 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM3O75382 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.94■■□□□ 1.1
TRIM3O75382 AC087393.1-201ENST00000582896 145 ntBASIC21.94■■□□□ 1.1
TRIM3O75382 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
TRIM3O75382 KRT18P10-201ENST00000388836 1287 ntBASIC21.93■■□□□ 1.1
TRIM3O75382 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.93■■□□□ 1.1
TRIM3O75382 RPS2P7-201ENST00000447334 885 ntBASIC21.93■■□□□ 1.1
TRIM3O75382 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM3O75382 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.92■■□□□ 1.1
TRIM3O75382 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM3O75382 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM3O75382 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM3O75382 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM3O75382 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM3O75382 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
TRIM3O75382 DUSP8P4-201ENST00000399538 1761 ntBASIC21.92■■□□□ 1.1
TRIM3O75382 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM3O75382 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM3O75382 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.91■■□□□ 1.1
TRIM3O75382 AC010980.1-201ENST00000587192 1142 ntBASIC21.91■■□□□ 1.1
TRIM3O75382 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM3O75382 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM3O75382 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.9■■□□□ 1.1
TRIM3O75382 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.9■■□□□ 1.1
TRIM3O75382 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM3O75382 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
TRIM3O75382 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM3O75382 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
TRIM3O75382 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.9■■□□□ 1.1
TRIM3O75382 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM3O75382 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM3O75382 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM3O75382 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.89■■□□□ 1.09
TRIM3O75382 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM3O75382 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM3O75382 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM3O75382 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM3O75382 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM3O75382 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
TRIM3O75382 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.88■■□□□ 1.09
TRIM3O75382 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM3O75382 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM3O75382 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM3O75382 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM3O75382 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
TRIM3O75382 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
TRIM3O75382 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM3O75382 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
TRIM3O75382 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.87■■□□□ 1.09
TRIM3O75382 PVT1_1.1-201ENST00000615125 194 ntBASIC21.87■■□□□ 1.09
TRIM3O75382 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM3O75382 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.87■■□□□ 1.09
TRIM3O75382 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM3O75382 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.86■■□□□ 1.09
TRIM3O75382 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.86■■□□□ 1.09
TRIM3O75382 RARRES2P1-201ENST00000474487 481 ntBASIC21.86■■□□□ 1.09
TRIM3O75382 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms