Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
CDX4O14627 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.33■■□□□ 1.33
CDX4O14627 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.33■■□□□ 1.33
CDX4O14627 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.33■■□□□ 1.33
CDX4O14627 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.33■■□□□ 1.32
CDX4O14627 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CDX4O14627 BX255925.1-201ENST00000566954 1854 ntBASIC23.32■■□□□ 1.32
CDX4O14627 AC135279.3-201ENST00000610945 1311 ntBASIC23.32■■□□□ 1.32
CDX4O14627 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.32■■□□□ 1.32
CDX4O14627 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.31■■□□□ 1.32
CDX4O14627 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDX4O14627 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CDX4O14627 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.31■■□□□ 1.32
CDX4O14627 AC011551.1-201ENST00000614101 683 ntBASIC23.31■■□□□ 1.32
CDX4O14627 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDX4O14627 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
CDX4O14627 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.3■■□□□ 1.32
CDX4O14627 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CDX4O14627 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.3■■□□□ 1.32
CDX4O14627 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.3■■□□□ 1.32
CDX4O14627 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.3■■□□□ 1.32
CDX4O14627 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CDX4O14627 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDX4O14627 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.29■■□□□ 1.32
CDX4O14627 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.29■■□□□ 1.32
CDX4O14627 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDX4O14627 SUDS3P1-201ENST00000505831 966 ntBASIC23.29■■□□□ 1.32
CDX4O14627 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDX4O14627 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDX4O14627 AC104564.3-201ENST00000582367 638 ntBASIC23.29■■□□□ 1.32
CDX4O14627 AL031432.3-201ENST00000607698 485 ntBASIC23.29■■□□□ 1.32
CDX4O14627 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDX4O14627 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDX4O14627 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDX4O14627 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDX4O14627 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDX4O14627 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CDX4O14627 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.28■■□□□ 1.32
CDX4O14627 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.28■■□□□ 1.32
CDX4O14627 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.28■■□□□ 1.32
CDX4O14627 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.28■■□□□ 1.32
CDX4O14627 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
CDX4O14627 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDX4O14627 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDX4O14627 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDX4O14627 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
CDX4O14627 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.27■■□□□ 1.32
CDX4O14627 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CDX4O14627 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC23.27■■□□□ 1.32
CDX4O14627 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
CDX4O14627 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.26■■□□□ 1.31
CDX4O14627 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CDX4O14627 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.26■■□□□ 1.31
CDX4O14627 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDX4O14627 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDX4O14627 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.25■■□□□ 1.31
CDX4O14627 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.25■■□□□ 1.31
CDX4O14627 MIR5787-201ENST00000611784 55 ntBASIC23.25■■□□□ 1.31
CDX4O14627 UNC93B3-201ENST00000308076 687 ntBASIC23.24■■□□□ 1.31
CDX4O14627 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
CDX4O14627 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CDX4O14627 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.24■■□□□ 1.31
CDX4O14627 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CDX4O14627 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CDX4O14627 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.23■■□□□ 1.31
CDX4O14627 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDX4O14627 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.23■■□□□ 1.31
CDX4O14627 AF131216.4-201ENST00000638924 1588 ntBASIC23.23■■□□□ 1.31
CDX4O14627 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
CDX4O14627 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.22■■□□□ 1.31
CDX4O14627 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.22■■□□□ 1.31
CDX4O14627 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDX4O14627 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CDX4O14627 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDX4O14627 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDX4O14627 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDX4O14627 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CDX4O14627 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDX4O14627 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.21■■□□□ 1.31
CDX4O14627 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.21■■□□□ 1.31
CDX4O14627 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.21■■□□□ 1.31
CDX4O14627 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.21■■□□□ 1.31
CDX4O14627 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
CDX4O14627 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDX4O14627 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDX4O14627 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDX4O14627 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
CDX4O14627 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CDX4O14627 AL136162.1-201ENST00000607711 1078 ntBASIC23.2■■□□□ 1.3
CDX4O14627 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDX4O14627 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDX4O14627 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.19■■□□□ 1.3
CDX4O14627 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CDX4O14627 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.19■■□□□ 1.3
CDX4O14627 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDX4O14627 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDX4O14627 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDX4O14627 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDX4O14627 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.18■■□□□ 1.3
CDX4O14627 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms