Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALYREFQ86V81 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALYREFQ86V81 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALYREFQ86V81 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALYREFQ86V81 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALYREFQ86V81 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ALYREFQ86V81 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.29■□□□□ 0.36
ALYREFQ86V81 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALYREFQ86V81 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ALYREFQ86V81 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALYREFQ86V81 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALYREFQ86V81 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.29■□□□□ 0.36
ALYREFQ86V81 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.29■□□□□ 0.36
ALYREFQ86V81 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.29■□□□□ 0.36
ALYREFQ86V81 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.29■□□□□ 0.36
ALYREFQ86V81 AC026150.2-201ENST00000564693 1156 ntBASIC17.29■□□□□ 0.36
ALYREFQ86V81 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.29■□□□□ 0.36
ALYREFQ86V81 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ALYREFQ86V81 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ALYREFQ86V81 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.29■□□□□ 0.36
ALYREFQ86V81 AC099568.2-201ENST00000609194 695 ntBASIC17.29■□□□□ 0.36
ALYREFQ86V81 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
ALYREFQ86V81 AD001527.2-201ENST00000622994 785 ntBASIC17.29■□□□□ 0.36
ALYREFQ86V81 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALYREFQ86V81 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.29■□□□□ 0.36
ALYREFQ86V81 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ALYREFQ86V81 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
ALYREFQ86V81 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALYREFQ86V81 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ALYREFQ86V81 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ALYREFQ86V81 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALYREFQ86V81 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
ALYREFQ86V81 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.29■□□□□ 0.36
ALYREFQ86V81 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALYREFQ86V81 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ALYREFQ86V81 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.28■□□□□ 0.36
ALYREFQ86V81 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALYREFQ86V81 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALYREFQ86V81 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.28■□□□□ 0.36
ALYREFQ86V81 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
ALYREFQ86V81 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ALYREFQ86V81 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ALYREFQ86V81 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
ALYREFQ86V81 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.28■□□□□ 0.36
ALYREFQ86V81 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALYREFQ86V81 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.28■□□□□ 0.36
ALYREFQ86V81 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALYREFQ86V81 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALYREFQ86V81 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALYREFQ86V81 ACTBP11-201ENST00000436287 1126 ntBASIC17.28■□□□□ 0.36
ALYREFQ86V81 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.28■□□□□ 0.36
ALYREFQ86V81 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALYREFQ86V81 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.28■□□□□ 0.36
ALYREFQ86V81 CXCL1P1-201ENST00000502804 216 ntBASIC17.28■□□□□ 0.36
ALYREFQ86V81 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ALYREFQ86V81 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17.28■□□□□ 0.36
ALYREFQ86V81 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.28■□□□□ 0.36
ALYREFQ86V81 AC103810.3-201ENST00000583567 96 ntBASIC17.28■□□□□ 0.36
ALYREFQ86V81 GGTLC5P-201ENST00000617623 998 ntBASIC17.28■□□□□ 0.36
ALYREFQ86V81 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.28■□□□□ 0.36
ALYREFQ86V81 AL805961.1-202ENST00000641562 540 ntBASIC17.28■□□□□ 0.36
ALYREFQ86V81 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.28■□□□□ 0.36
ALYREFQ86V81 PCDHA1-201ENST00000378133 2726 ntBASIC17.28■□□□□ 0.36
ALYREFQ86V81 AC116353.5-201ENST00000638148 1699 ntBASIC17.28■□□□□ 0.36
ALYREFQ86V81 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALYREFQ86V81 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALYREFQ86V81 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALYREFQ86V81 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ALYREFQ86V81 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ALYREFQ86V81 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALYREFQ86V81 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALYREFQ86V81 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.28■□□□□ 0.36
ALYREFQ86V81 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ALYREFQ86V81 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALYREFQ86V81 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.27■□□□□ 0.36
ALYREFQ86V81 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ALYREFQ86V81 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ALYREFQ86V81 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALYREFQ86V81 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
ALYREFQ86V81 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ALYREFQ86V81 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.27■□□□□ 0.36
ALYREFQ86V81 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALYREFQ86V81 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.27■□□□□ 0.36
ALYREFQ86V81 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.27■□□□□ 0.36
ALYREFQ86V81 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.27■□□□□ 0.36
ALYREFQ86V81 AC007967.3-201ENST00000434308 558 ntBASIC17.27■□□□□ 0.36
ALYREFQ86V81 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALYREFQ86V81 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.27■□□□□ 0.36
ALYREFQ86V81 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALYREFQ86V81 KRT8P23-201ENST00000560090 1207 ntBASIC17.27■□□□□ 0.36
ALYREFQ86V81 AC140912.1-201ENST00000577171 1054 ntBASIC17.27■□□□□ 0.36
ALYREFQ86V81 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.27■□□□□ 0.36
ALYREFQ86V81 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
ALYREFQ86V81 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ALYREFQ86V81 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ALYREFQ86V81 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.27■□□□□ 0.36
ALYREFQ86V81 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ALYREFQ86V81 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
ALYREFQ86V81 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ALYREFQ86V81 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms