RNA–Protein interactions for RNA: ENST00000548356.1

C12orf49-204, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 2 BASIC

Gene C12orf49, Length 923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-204ENST00000548356 NISCHQ9Y2I1 1504 aa37.34■■■■□ 3.57
C12orf49-204ENST00000548356 ABCC9O60706 1549 aa34.14■■■■□ 3.06
C12orf49-204ENST00000548356 CCDC180Q9P1Z9 1646 aa33.71■■■□□ 2.99
C12orf49-204ENST00000548356 DNAJC5BQ9UF47 199 aa32.45■■■□□ 2.79
C12orf49-204ENST00000548356 RB1CC1Q8TDY2 1594 aa32.32■■■□□ 2.77
C12orf49-204ENST00000548356 NACADO15069 1562 aa32■■■□□ 2.71
C12orf49-204ENST00000548356 PABPN1Q86U42 306 aaKnown RBP eCLIP31.7■■■□□ 2.67
C12orf49-204ENST00000548356 DCAF8L2P0C7V8 631 aa31.65■■■□□ 2.66
C12orf49-204ENST00000548356 UNC13AQ9UPW8 1703 aa31.52■■■□□ 2.64
C12orf49-204ENST00000548356 MYO15BQ96JP2 1530 aa31.45■■■□□ 2.63
C12orf49-204ENST00000548356 BICRAQ9NZM4 1560 aa31.39■■■□□ 2.61
C12orf49-204ENST00000548356 SHROOM4Q9ULL8 1493 aa31■■■□□ 2.55
C12orf49-204ENST00000548356 DCAF1Q9Y4B6 1507 aa30.86■■■□□ 2.53
C12orf49-204ENST00000548356 ZCCHC6Q5VYS8 1495 aaKnown RBP30.85■■■□□ 2.53
C12orf49-204ENST00000548356 CECR2Q9BXF3 1484 aa30.83■■■□□ 2.53
C12orf49-204ENST00000548356 CC2D2AQ9P2K1 1620 aa30.82■■■□□ 2.52
C12orf49-204ENST00000548356 EIF4G1Q04637 1599 aaKnown RBP30.66■■■□□ 2.5
C12orf49-204ENST00000548356 SCRIBQ14160 1630 aa30.64■■■□□ 2.5
C12orf49-204ENST00000548356 DNAJC5Q9H3Z4 198 aa30.2■■■□□ 2.43
C12orf49-204ENST00000548356 CUX2O14529 1486 aa29.68■■■□□ 2.34
C12orf49-204ENST00000548356 NCAPD3P42695 1498 aa29.56■■■□□ 2.32
C12orf49-204ENST00000548356 ERCC6Q03468 1493 aa29.53■■■□□ 2.32
C12orf49-204ENST00000548356 ATAD2BQ9ULI0 1458 aa29.38■■■□□ 2.29
C12orf49-204ENST00000548356 HMGXB3Q12766 1538 aa29.29■■■□□ 2.28
C12orf49-204ENST00000548356 SMARCA2P51531 1590 aa29.28■■■□□ 2.28
C12orf49-204ENST00000548356 SMARCA4P51532 1647 aa29.21■■■□□ 2.27
C12orf49-204ENST00000548356 NESP48681 1621 aa29.19■■■□□ 2.26
C12orf49-204ENST00000548356 BAZ1BQ9UIG0 1483 aaKnown RBP29.06■■■□□ 2.24
C12orf49-204ENST00000548356 BAZ1AQ9NRL2 1556 aaPredicted RBP29.02■■■□□ 2.24
C12orf49-204ENST00000548356 THOC2Q8NI27 1593 aaKnown RBP29.01■■■□□ 2.23
C12orf49-204ENST00000548356 PEG3Q9GZU2 1588 aa28.97■■■□□ 2.23
C12orf49-204ENST00000548356 LAMC3Q9Y6N6 1575 aa28.95■■■□□ 2.22
C12orf49-204ENST00000548356 PDS5BQ9NTI5 1447 aa28.82■■■□□ 2.2
C12orf49-204ENST00000548356 KIF21AQ7Z4S6 1674 aa28.77■■■□□ 2.2
C12orf49-204ENST00000548356 MROH2BQ7Z745 1585 aa28.74■■■□□ 2.19
C12orf49-204ENST00000548356 CADPSQ9ULU8 1353 aa28.63■■■□□ 2.17
C12orf49-204ENST00000548356 TRIM41Q8WV44 630 aa28.6■■■□□ 2.17
C12orf49-204ENST00000548356 MRC2Q9UBG0 1479 aa28.58■■■□□ 2.17
C12orf49-204ENST00000548356 WDR62O43379 1518 aa28.53■■■□□ 2.16
C12orf49-204ENST00000548356 CEP164Q9UPV0 1460 aa28.36■■■□□ 2.13
C12orf49-204ENST00000548356 WIZO95785 1651 aa28.35■■■□□ 2.13
C12orf49-204ENST00000548356 FANCD2Q9BXW9 1451 aa28.28■■■□□ 2.12
C12orf49-204ENST00000548356 OSCARQ8IYS5 282 aa28.23■■■□□ 2.11
C12orf49-204ENST00000548356 CFTRP13569 1480 aa28.21■■■□□ 2.11
C12orf49-204ENST00000548356 URB2Q14146 1524 aaKnown RBP28.08■■■□□ 2.08
C12orf49-204ENST00000548356 TOP2AP11388 1531 aaKnown RBP28■■■□□ 2.07
C12orf49-204ENST00000548356 RSF1Q96T23 1441 aaPredicted RBP27.99■■■□□ 2.07
C12orf49-204ENST00000548356 RIMBP3CA6NJZ7 1639 aa27.88■■■□□ 2.05
C12orf49-204ENST00000548356 RIMBP3BA6NNM3 1639 aa27.88■■■□□ 2.05
C12orf49-204ENST00000548356 RIMBP3Q9UFD9 1639 aa27.88■■■□□ 2.05
C12orf49-204ENST00000548356 IFT140Q96RY7 1462 aa27.83■■■□□ 2.05
C12orf49-204ENST00000548356 PRDM2Q13029 1718 aa27.82■■■□□ 2.04
C12orf49-204ENST00000548356 ZNF608Q9ULD9 1512 aaPredicted RBP27.8■■■□□ 2.04
C12orf49-204ENST00000548356 ARHGEF11O15085 1522 aa27.76■■■□□ 2.03
C12orf49-204ENST00000548356 TOPBP1Q92547 1522 aa27.69■■■□□ 2.02
C12orf49-204ENST00000548356 CCDC88BA6NC98 1476 aa27.68■■■□□ 2.02
C12orf49-204ENST00000548356 ABCC8Q09428 1581 aa27.64■■■□□ 2.01
C12orf49-204ENST00000548356 EIF4G3O43432 1585 aaKnown RBP27.61■■■□□ 2.01
C12orf49-204ENST00000548356 CYB5RLQ6IPT4 315 aa27.57■■■□□ 2
C12orf49-204ENST00000548356 DNMBPQ6XZF7 1577 aa27.56■■■□□ 2
C12orf49-204ENST00000548356 AQRO60306 1485 aaKnown RBP eCLIP27.49■■□□□ 1.99
C12orf49-204ENST00000548356 TARBP1Q13395 1621 aaKnown RBP27.48■■□□□ 1.99
C12orf49-204ENST00000548356 CHD1O14646 1710 aa27.47■■□□□ 1.99
C12orf49-204ENST00000548356 ARAP1Q96P48 1450 aa27.45■■□□□ 1.99
C12orf49-204ENST00000548356 TRHP20396 242 aaPredicted RBP27.41■■□□□ 1.98
C12orf49-204ENST00000548356 POLA1P09884 1462 aaPredicted RBP27.38■■□□□ 1.97
C12orf49-204ENST00000548356 FBLN2P98095 1184 aa27.38■■□□□ 1.97
C12orf49-204ENST00000548356 RAD54L2Q9Y4B4 1467 aa27.27■■□□□ 1.96
C12orf49-204ENST00000548356 SOGA1O94964 1423 aa27.25■■□□□ 1.95
C12orf49-204ENST00000548356 TDRD9Q8NDG6 1382 aaKnown RBP27.24■■□□□ 1.95
C12orf49-204ENST00000548356 WDR97A6NE52 1622 aa27.22■■□□□ 1.95
C12orf49-204ENST00000548356 CLASP1Q7Z460 1538 aa27.21■■□□□ 1.95
C12orf49-204ENST00000548356 SNAPC4Q5SXM2 1469 aa27.2■■□□□ 1.95
C12orf49-204ENST00000548356 SYNJ1O43426 1573 aa27.14■■□□□ 1.94
C12orf49-204ENST00000548356 MAGI1Q96QZ7 1491 aaPredicted RBP27.14■■□□□ 1.94
C12orf49-204ENST00000548356 CHMP7Q8WUX9 453 aaPredicted RBP27.14■■□□□ 1.94
C12orf49-204ENST00000548356 FGD5Q6ZNL6 1462 aa27.13■■□□□ 1.93
C12orf49-204ENST00000548356 GRIN2BQ13224 1484 aa27.08■■□□□ 1.93
C12orf49-204ENST00000548356 SYNJ2O15056 1496 aa27.05■■□□□ 1.92
C12orf49-204ENST00000548356 CUX1P39880 1505 aa27.03■■□□□ 1.92
C12orf49-204ENST00000548356 AEBP2Q6ZN18 517 aaPredicted RBP26.97■■□□□ 1.91
C12orf49-204ENST00000548356 GAPVD1Q14C86 1478 aa26.93■■□□□ 1.9
C12orf49-204ENST00000548356 PBRM1Q86U86 1689 aa26.89■■□□□ 1.89
C12orf49-204ENST00000548356 ABCA10Q8WWZ4 1543 aa26.83■■□□□ 1.89
C12orf49-204ENST00000548356 ABCA5Q8WWZ7 1642 aa26.8■■□□□ 1.88
C12orf49-204ENST00000548356 GRIN2AQ12879 1464 aa26.73■■□□□ 1.87
C12orf49-204ENST00000548356 ERCC6L2Q5T890 1561 aa26.71■■□□□ 1.87
C12orf49-204ENST00000548356 NUP160Q12769 1436 aa26.67■■□□□ 1.86
C12orf49-204ENST00000548356 CEP170Q5SW79 1584 aa26.65■■□□□ 1.86
C12orf49-204ENST00000548356 ADAMTS12P58397 1594 aa26.64■■□□□ 1.86
C12orf49-204ENST00000548356 WRNQ14191 1432 aaPredicted RBP eCLIP26.63■■□□□ 1.85
C12orf49-204ENST00000548356 SHROOM2Q13796 1616 aa26.59■■□□□ 1.85
C12orf49-204ENST00000548356 FHAD1B1AJZ9 1412 aa26.57■■□□□ 1.84
C12orf49-204ENST00000548356 ERICH3Q5RHP9 1530 aa26.49■■□□□ 1.83
C12orf49-204ENST00000548356 TOP2BQ02880 1626 aa26.48■■□□□ 1.83
C12orf49-204ENST00000548356 BIVM-ERCC5R4GMW8 1640 aa26.47■■□□□ 1.83
C12orf49-204ENST00000548356 KIF13AQ9H1H9 1805 aa26.45■■□□□ 1.82
C12orf49-204ENST00000548356 PRG4Q92954 1404 aaPredicted RBP26.43■■□□□ 1.82
C12orf49-204ENST00000548356 JPH4Q96JJ6 628 aa26.38■■□□□ 1.81
C12orf49-204ENST00000548356 SUPT5HO00267 1087 aaKnown RBP26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms