Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5BP61020 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RAB5BP61020 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.9□□□□□ -0.34
RAB5BP61020 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC12.9□□□□□ -0.34
RAB5BP61020 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
RAB5BP61020 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB5BP61020 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RAB5BP61020 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.9□□□□□ -0.34
RAB5BP61020 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB5BP61020 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB5BP61020 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB5BP61020 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB5BP61020 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
RAB5BP61020 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.9□□□□□ -0.34
RAB5BP61020 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.9□□□□□ -0.34
RAB5BP61020 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
RAB5BP61020 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
RAB5BP61020 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.9□□□□□ -0.34
RAB5BP61020 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB5BP61020 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.9□□□□□ -0.34
RAB5BP61020 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB5BP61020 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.9□□□□□ -0.34
RAB5BP61020 AL645728.1-201ENST00000366221 2101 ntBASIC12.9□□□□□ -0.34
RAB5BP61020 MIR564-202ENST00000385049 94 ntBASIC12.9□□□□□ -0.34
RAB5BP61020 CNN2P6-201ENST00000439038 900 ntBASIC12.9□□□□□ -0.34
RAB5BP61020 ABHD17AP6-201ENST00000458502 1044 ntBASIC12.9□□□□□ -0.34
RAB5BP61020 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RAB5BP61020 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC12.9□□□□□ -0.34
RAB5BP61020 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RAB5BP61020 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC12.9□□□□□ -0.34
RAB5BP61020 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC12.9□□□□□ -0.34
RAB5BP61020 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RAB5BP61020 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC12.9□□□□□ -0.34
RAB5BP61020 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB5BP61020 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RAB5BP61020 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB5BP61020 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
RAB5BP61020 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB5BP61020 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RAB5BP61020 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
RAB5BP61020 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB5BP61020 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.9□□□□□ -0.34
RAB5BP61020 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB5BP61020 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB5BP61020 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB5BP61020 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB5BP61020 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
RAB5BP61020 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.9□□□□□ -0.34
RAB5BP61020 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB5BP61020 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB5BP61020 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.9□□□□□ -0.34
RAB5BP61020 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
RAB5BP61020 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
RAB5BP61020 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
RAB5BP61020 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
RAB5BP61020 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
RAB5BP61020 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.9□□□□□ -0.35
RAB5BP61020 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAB5BP61020 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB5BP61020 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
RAB5BP61020 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
RAB5BP61020 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.89□□□□□ -0.35
RAB5BP61020 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB5BP61020 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAB5BP61020 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.89□□□□□ -0.35
RAB5BP61020 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB5BP61020 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.89□□□□□ -0.35
RAB5BP61020 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB5BP61020 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB5BP61020 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB5BP61020 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC12.89□□□□□ -0.35
RAB5BP61020 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB5BP61020 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.89□□□□□ -0.35
RAB5BP61020 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB5BP61020 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB5BP61020 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB5BP61020 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RAB5BP61020 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
RAB5BP61020 MCCD1P1-208ENST00000445732 328 ntBASIC12.89□□□□□ -0.35
RAB5BP61020 HLA-J-202ENST00000469281 1241 ntBASIC12.89□□□□□ -0.35
RAB5BP61020 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
RAB5BP61020 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC12.89□□□□□ -0.35
RAB5BP61020 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC12.89□□□□□ -0.35
RAB5BP61020 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC12.89□□□□□ -0.35
RAB5BP61020 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB5BP61020 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
RAB5BP61020 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.89□□□□□ -0.35
RAB5BP61020 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.89□□□□□ -0.35
RAB5BP61020 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB5BP61020 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAB5BP61020 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
RAB5BP61020 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB5BP61020 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB5BP61020 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB5BP61020 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB5BP61020 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.89□□□□□ -0.35
RAB5BP61020 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB5BP61020 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB5BP61020 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
RAB5BP61020 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms