Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 IGHV3-42-201ENST00000520410 361 ntBASIC12.06□□□□□ -0.48
APOC4P55056 AC069120.2-201ENST00000524091 540 ntBASIC12.06□□□□□ -0.48
APOC4P55056 RPL28-205ENST00000558131 444 ntTSL 5 BASIC12.06□□□□□ -0.48
APOC4P55056 AC140878.1-201ENST00000565277 250 ntBASIC12.06□□□□□ -0.48
APOC4P55056 AL138918.1-201ENST00000568306 659 ntBASIC12.06□□□□□ -0.48
APOC4P55056 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.06□□□□□ -0.48
APOC4P55056 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
APOC4P55056 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.06□□□□□ -0.48
APOC4P55056 AC018529.1-201ENST00000613063 361 ntBASIC12.06□□□□□ -0.48
APOC4P55056 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.06□□□□□ -0.48
APOC4P55056 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC4P55056 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOC4P55056 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC4P55056 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC12.06□□□□□ -0.48
APOC4P55056 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOC4P55056 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC4P55056 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.06□□□□□ -0.48
APOC4P55056 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC4P55056 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.06□□□□□ -0.48
APOC4P55056 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
APOC4P55056 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC4P55056 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC4P55056 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
APOC4P55056 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
APOC4P55056 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
APOC4P55056 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
APOC4P55056 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC4P55056 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC12.06□□□□□ -0.48
APOC4P55056 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC4P55056 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC4P55056 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC4P55056 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC4P55056 AL645728.1-201ENST00000366221 2101 ntBASIC12.05□□□□□ -0.48
APOC4P55056 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC12.05□□□□□ -0.48
APOC4P55056 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
APOC4P55056 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
APOC4P55056 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.05□□□□□ -0.48
APOC4P55056 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC4P55056 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.05□□□□□ -0.48
APOC4P55056 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC4P55056 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
APOC4P55056 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
APOC4P55056 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC4P55056 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC4P55056 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.05□□□□□ -0.48
APOC4P55056 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
APOC4P55056 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
APOC4P55056 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC12.05□□□□□ -0.48
APOC4P55056 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC4P55056 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC4P55056 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC4P55056 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC4P55056 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
APOC4P55056 MIR943-201ENST00000401286 94 ntBASIC12.05□□□□□ -0.48
APOC4P55056 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.05□□□□□ -0.48
APOC4P55056 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
APOC4P55056 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC12.05□□□□□ -0.48
APOC4P55056 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC4P55056 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.05□□□□□ -0.48
APOC4P55056 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.05□□□□□ -0.48
APOC4P55056 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC12.05□□□□□ -0.48
APOC4P55056 AC003101.2-201ENST00000612557 442 ntBASIC12.05□□□□□ -0.48
APOC4P55056 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC4P55056 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC4P55056 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC4P55056 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC12.05□□□□□ -0.48
APOC4P55056 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
APOC4P55056 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.05□□□□□ -0.48
APOC4P55056 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
APOC4P55056 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
APOC4P55056 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC4P55056 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
APOC4P55056 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC12.05□□□□□ -0.48
APOC4P55056 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
APOC4P55056 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
APOC4P55056 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC4P55056 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.05□□□□□ -0.48
APOC4P55056 SNX33P1-201ENST00000592116 1762 ntBASIC12.05□□□□□ -0.48
APOC4P55056 AL035456.1-201ENST00000456064 1369 ntBASIC12.05□□□□□ -0.48
APOC4P55056 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
APOC4P55056 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
APOC4P55056 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
APOC4P55056 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC4P55056 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC4P55056 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
APOC4P55056 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC4P55056 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
APOC4P55056 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC4P55056 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
APOC4P55056 AL645608.8-201ENST00000606034 2086 ntBASIC12.04□□□□□ -0.48
APOC4P55056 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
APOC4P55056 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC4P55056 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC12.04□□□□□ -0.48
APOC4P55056 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC4P55056 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
APOC4P55056 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.04□□□□□ -0.48
APOC4P55056 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
APOC4P55056 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC4P55056 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC4P55056 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms