Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 CYP2C19-201ENST00000371321 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 CYP2D8P-201ENST00000433633 1490 ntBASIC19.6■□□□□ 0.73
RTN4Q9NQC3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 MIR600HG-201ENST00000449175 5984 ntBASIC19.6■□□□□ 0.73
RTN4Q9NQC3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 MIR718-201ENST00000390190 70 ntBASIC19.6■□□□□ 0.73
RTN4Q9NQC3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 PVRIG2P-201ENST00000435460 978 ntBASIC19.6■□□□□ 0.73
RTN4Q9NQC3 BTG3P1-201ENST00000435859 716 ntBASIC19.6■□□□□ 0.73
RTN4Q9NQC3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 AC009949.1-201ENST00000623048 1830 ntBASIC19.6■□□□□ 0.73
RTN4Q9NQC3 KCP-203ENST00000610776 5108 ntTSL 5 BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN4Q9NQC3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 PAX6-247ENST00000638965 979 ntTSL 5 BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 AC023157.3-201ENST00000619086 2088 ntBASIC19.59■□□□□ 0.73
RTN4Q9NQC3 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 KRT8P9-201ENST00000558927 1449 ntBASIC19.59■□□□□ 0.73
RTN4Q9NQC3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4Q9NQC3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTN4Q9NQC3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTN4Q9NQC3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTN4Q9NQC3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTN4Q9NQC3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.58■□□□□ 0.73
RTN4Q9NQC3 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RTN4Q9NQC3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC19.58■□□□□ 0.73
RTN4Q9NQC3 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTN4Q9NQC3 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
RTN4Q9NQC3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTN4Q9NQC3 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTN4Q9NQC3 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RTN4Q9NQC3 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC19.58■□□□□ 0.73
RTN4Q9NQC3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTN4Q9NQC3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
RTN4Q9NQC3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RTN4Q9NQC3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTN4Q9NQC3 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTN4Q9NQC3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTN4Q9NQC3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.58■□□□□ 0.72
RTN4Q9NQC3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.58■□□□□ 0.72
RTN4Q9NQC3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
RTN4Q9NQC3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
RTN4Q9NQC3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.58■□□□□ 0.72
RTN4Q9NQC3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.58■□□□□ 0.72
RTN4Q9NQC3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms