Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 SLC25A1P2-201ENST00000430693 912 ntBASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 GUSBP6-202ENST00000438529 1198 ntBASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 AF186192.3-201ENST00000583427 947 ntBASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 TK1-205ENST00000590862 642 ntTSL 3 BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 AC087623.3-201ENST00000607047 1098 ntBASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 AC024243.1-201ENST00000609234 778 ntBASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 AL023803.3-201ENST00000615559 522 ntBASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CHCHD1Q96BP2 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
CHCHD1Q96BP2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CHCHD1Q96BP2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CHCHD1Q96BP2 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CHCHD1Q96BP2 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CHCHD1Q96BP2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC12.02□□□□□ -0.48
CHCHD1Q96BP2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.02□□□□□ -0.48
CHCHD1Q96BP2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CHCHD1Q96BP2 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CHCHD1Q96BP2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.02□□□□□ -0.48
CHCHD1Q96BP2 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CHCHD1Q96BP2 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CHCHD1Q96BP2 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CHCHD1Q96BP2 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.02□□□□□ -0.48
CHCHD1Q96BP2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 TSPY6P-201ENST00000448518 926 ntBASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 STK25P1-201ENST00000585406 838 ntBASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 LINC01144-201ENST00000626198 1710 ntBASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 KRT8P49-201ENST00000604166 1432 ntBASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms