Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 AC112907.2-201ENST00000448639 330 ntBASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 ATP5G1P1-201ENST00000448724 379 ntBASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 POU5F1P6-201ENST00000466990 990 ntBASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 YBX1P2-201ENST00000489612 999 ntBASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 AC011840.4-201ENST00000578471 627 ntBASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 AC139887.4-201ENST00000607877 719 ntBASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 AC138035.3-201ENST00000622706 2791 ntBASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 SIGLEC30P-201ENST00000455569 941 ntBASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 AC009533.2-201ENST00000543664 586 ntBASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 HYMAI.1-201ENST00000620949 238 ntBASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 CICP24-201ENST00000605464 2705 ntBASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH3Q8TBE1 AC106881.1-201ENST00000605849 3329 ntBASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 AL109954.1-202ENST00000564051 2148 ntBASIC15.1■□□□□ 0.01
CNIH3Q8TBE1 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms