Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CARMIL3Q8ND23 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CARMIL3Q8ND23 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.47■□□□□ 0.87
CARMIL3Q8ND23 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CARMIL3Q8ND23 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CARMIL3Q8ND23 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CARMIL3Q8ND23 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CARMIL3Q8ND23 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CARMIL3Q8ND23 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CARMIL3Q8ND23 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.47■□□□□ 0.87
CARMIL3Q8ND23 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CARMIL3Q8ND23 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CARMIL3Q8ND23 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
CARMIL3Q8ND23 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CARMIL3Q8ND23 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 ORC6-206ENST00000568364 888 ntTSL 5 BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 AC093726.1-201ENST00000608064 963 ntBASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 AC012313.1-201ENST00000593393 3059 ntBASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 AP001094.4-201ENST00000579008 2176 ntBASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 NEU3-203ENST00000529024 581 ntTSL 3 BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 AC092552.1-201ENST00000547243 906 ntBASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 MIR6069-201ENST00000620069 79 ntBASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CARMIL3Q8ND23 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
CARMIL3Q8ND23 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC20.45■□□□□ 0.87
CARMIL3Q8ND23 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CARMIL3Q8ND23 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 AL512652.2-201ENST00000625156 1716 ntBASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC20.45■□□□□ 0.86
CARMIL3Q8ND23 AC092337.1-201ENST00000568699 1129 ntBASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms