Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 FAM86EP-206ENST00000510506 987 ntBASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 CYP2A7P1-201ENST00000595391 815 ntBASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 LINC01023-201ENST00000606054 436 ntBASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 AL139424.1-201ENST00000607572 797 ntBASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRTM1Q86UE6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 SLC22A20-204ENST00000530038 1673 ntBASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 AC016027.1-202ENST00000607927 1699 ntBASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 AP005117.1-201ENST00000584346 1413 ntBASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 PPT1-215ENST00000641471 2368 ntBASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 MIR648-201ENST00000385046 94 ntBASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 PMS2P1-201ENST00000431037 1228 ntBASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 RN7SL850P-201ENST00000579959 291 ntBASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM1Q86UE6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms