Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.56■□□□□ 0.72
CTR9Q6PD62 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.56■□□□□ 0.72
CTR9Q6PD62 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CTR9Q6PD62 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.56■□□□□ 0.72
CTR9Q6PD62 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTR9Q6PD62 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTR9Q6PD62 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CTR9Q6PD62 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTR9Q6PD62 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTR9Q6PD62 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTR9Q6PD62 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.56■□□□□ 0.72
CTR9Q6PD62 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTR9Q6PD62 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTR9Q6PD62 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTR9Q6PD62 AD000864.1-201ENST00000624076 2295 ntBASIC19.55■□□□□ 0.72
CTR9Q6PD62 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTR9Q6PD62 TUBB3P1-201ENST00000405796 1332 ntBASIC19.55■□□□□ 0.72
CTR9Q6PD62 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CTR9Q6PD62 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CTR9Q6PD62 AC011676.5-201ENST00000624864 2660 ntBASIC19.55■□□□□ 0.72
CTR9Q6PD62 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTR9Q6PD62 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTR9Q6PD62 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTR9Q6PD62 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTR9Q6PD62 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTR9Q6PD62 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
CTR9Q6PD62 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.55■□□□□ 0.72
CTR9Q6PD62 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTR9Q6PD62 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.55■□□□□ 0.72
CTR9Q6PD62 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.55■□□□□ 0.72
CTR9Q6PD62 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.55■□□□□ 0.72
CTR9Q6PD62 CNN2P2-201ENST00000443536 909 ntBASIC19.55■□□□□ 0.72
CTR9Q6PD62 FAM86GP-201ENST00000448322 971 ntBASIC19.55■□□□□ 0.72
CTR9Q6PD62 CNN2P3-201ENST00000450201 906 ntBASIC19.55■□□□□ 0.72
CTR9Q6PD62 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CTR9Q6PD62 DUX4L27-201ENST00000554796 1261 ntBASIC19.55■□□□□ 0.72
CTR9Q6PD62 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.55■□□□□ 0.72
CTR9Q6PD62 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTR9Q6PD62 AL136317.3-201ENST00000618497 906 ntBASIC19.55■□□□□ 0.72
CTR9Q6PD62 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTR9Q6PD62 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTR9Q6PD62 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTR9Q6PD62 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CTR9Q6PD62 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTR9Q6PD62 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTR9Q6PD62 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTR9Q6PD62 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTR9Q6PD62 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.55■□□□□ 0.72
CTR9Q6PD62 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CTR9Q6PD62 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.54■□□□□ 0.72
CTR9Q6PD62 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTR9Q6PD62 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.54■□□□□ 0.72
CTR9Q6PD62 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTR9Q6PD62 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTR9Q6PD62 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTR9Q6PD62 PCGF3-213ENST00000620529 1899 ntBASIC19.54■□□□□ 0.72
CTR9Q6PD62 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
CTR9Q6PD62 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTR9Q6PD62 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CTR9Q6PD62 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTR9Q6PD62 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.54■□□□□ 0.72
CTR9Q6PD62 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTR9Q6PD62 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.54■□□□□ 0.72
CTR9Q6PD62 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTR9Q6PD62 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTR9Q6PD62 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CTR9Q6PD62 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.54■□□□□ 0.72
CTR9Q6PD62 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTR9Q6PD62 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTR9Q6PD62 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.54■□□□□ 0.72
CTR9Q6PD62 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CTR9Q6PD62 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.54■□□□□ 0.72
CTR9Q6PD62 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTR9Q6PD62 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.54■□□□□ 0.72
CTR9Q6PD62 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTR9Q6PD62 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.54■□□□□ 0.72
CTR9Q6PD62 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTR9Q6PD62 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTR9Q6PD62 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTR9Q6PD62 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTR9Q6PD62 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.54■□□□□ 0.72
CTR9Q6PD62 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTR9Q6PD62 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.54■□□□□ 0.72
CTR9Q6PD62 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTR9Q6PD62 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTR9Q6PD62 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CTR9Q6PD62 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTR9Q6PD62 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.53■□□□□ 0.72
CTR9Q6PD62 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTR9Q6PD62 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.53■□□□□ 0.72
CTR9Q6PD62 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CTR9Q6PD62 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTR9Q6PD62 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTR9Q6PD62 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTR9Q6PD62 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CTR9Q6PD62 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTR9Q6PD62 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CTR9Q6PD62 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTR9Q6PD62 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.53■□□□□ 0.72
CTR9Q6PD62 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms