Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND1P03886 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND1P03886 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
MT-ND1P03886 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.63■□□□□ 0.09
MT-ND1P03886 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.63■□□□□ 0.09
MT-ND1P03886 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.63■□□□□ 0.09
MT-ND1P03886 AC074051.2-201ENST00000565115 352 ntBASIC15.63■□□□□ 0.09
MT-ND1P03886 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.63■□□□□ 0.09
MT-ND1P03886 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.63■□□□□ 0.09
MT-ND1P03886 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.63■□□□□ 0.09
MT-ND1P03886 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.63■□□□□ 0.09
MT-ND1P03886 AC114341.1-201ENST00000618070 349 ntBASIC15.63■□□□□ 0.09
MT-ND1P03886 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND1P03886 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND1P03886 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND1P03886 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND1P03886 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND1P03886 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND1P03886 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND1P03886 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND1P03886 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND1P03886 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND1P03886 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND1P03886 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND1P03886 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND1P03886 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND1P03886 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND1P03886 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND1P03886 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND1P03886 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
MT-ND1P03886 AL512652.2-201ENST00000625156 1716 ntBASIC15.63■□□□□ 0.09
MT-ND1P03886 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND1P03886 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
MT-ND1P03886 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND1P03886 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
MT-ND1P03886 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.62■□□□□ 0.09
MT-ND1P03886 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND1P03886 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
MT-ND1P03886 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.62■□□□□ 0.09
MT-ND1P03886 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.62■□□□□ 0.09
MT-ND1P03886 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND1P03886 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
MT-ND1P03886 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
MT-ND1P03886 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.62■□□□□ 0.09
MT-ND1P03886 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND1P03886 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND1P03886 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
MT-ND1P03886 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
MT-ND1P03886 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND1P03886 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND1P03886 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND1P03886 SIGLEC30P-201ENST00000455569 941 ntBASIC15.62■□□□□ 0.09
MT-ND1P03886 AC104819.1-201ENST00000504587 486 ntBASIC15.62■□□□□ 0.09
MT-ND1P03886 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND1P03886 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.62■□□□□ 0.09
MT-ND1P03886 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.62■□□□□ 0.09
MT-ND1P03886 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND1P03886 MIR3180-1-201ENST00000580374 94 ntBASIC15.62■□□□□ 0.09
MT-ND1P03886 MIR3180-3-201ENST00000584616 94 ntBASIC15.62■□□□□ 0.09
MT-ND1P03886 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.62■□□□□ 0.09
MT-ND1P03886 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND1P03886 AC092329.2-201ENST00000598402 547 ntBASIC15.62■□□□□ 0.09
MT-ND1P03886 AC013467.2-201ENST00000605472 835 ntBASIC15.62■□□□□ 0.09
MT-ND1P03886 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
MT-ND1P03886 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
MT-ND1P03886 AL031731.1-201ENST00000642131 2094 ntBASIC15.62■□□□□ 0.09
MT-ND1P03886 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
MT-ND1P03886 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND1P03886 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND1P03886 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND1P03886 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
MT-ND1P03886 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
MT-ND1P03886 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND1P03886 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
MT-ND1P03886 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.62■□□□□ 0.09
MT-ND1P03886 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND1P03886 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND1P03886 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND1P03886 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND1P03886 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND1P03886 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND1P03886 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.62■□□□□ 0.09
MT-ND1P03886 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND1P03886 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND1P03886 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
MT-ND1P03886 AC243591.1-201ENST00000452967 1364 ntBASIC15.62■□□□□ 0.09
MT-ND1P03886 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND1P03886 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
MT-ND1P03886 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND1P03886 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND1P03886 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND1P03886 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
MT-ND1P03886 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND1P03886 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND1P03886 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND1P03886 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND1P03886 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND1P03886 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND1P03886 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND1P03886 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms