Protein–RNA interactions for Protein: Q6P3X3

TTC27, Tetratricopeptide repeat protein 27, humanhuman

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC27Q6P3X3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.07■□□□□ 0.32
TTC27Q6P3X3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.07■□□□□ 0.32
TTC27Q6P3X3 AC107918.4-202ENST00000641623 219 ntBASIC17.07■□□□□ 0.32
TTC27Q6P3X3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TTC27Q6P3X3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TTC27Q6P3X3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TTC27Q6P3X3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TTC27Q6P3X3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TTC27Q6P3X3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TTC27Q6P3X3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TTC27Q6P3X3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.07■□□□□ 0.32
TTC27Q6P3X3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.07■□□□□ 0.32
TTC27Q6P3X3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.07■□□□□ 0.32
TTC27Q6P3X3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.07■□□□□ 0.32
TTC27Q6P3X3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TTC27Q6P3X3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
TTC27Q6P3X3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 AL592424.1-201ENST00000563624 1536 ntBASIC17.06■□□□□ 0.32
TTC27Q6P3X3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 HCG4-201ENST00000418983 998 ntBASIC17.06■□□□□ 0.32
TTC27Q6P3X3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 AF238378.1-201ENST00000526806 358 ntBASIC17.06■□□□□ 0.32
TTC27Q6P3X3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 MIR3652-201ENST00000579335 131 ntBASIC17.06■□□□□ 0.32
TTC27Q6P3X3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 AL121772.3-201ENST00000610840 674 ntBASIC17.06■□□□□ 0.32
TTC27Q6P3X3 AC020765.3-201ENST00000613051 740 ntBASIC17.06■□□□□ 0.32
TTC27Q6P3X3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TTC27Q6P3X3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 AC005622.1-201ENST00000636801 1703 ntBASIC17.05■□□□□ 0.32
TTC27Q6P3X3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 AC129492.6-201ENST00000611383 1305 ntBASIC17.05■□□□□ 0.32
TTC27Q6P3X3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 AC016027.1-202ENST00000607927 1699 ntBASIC17.05■□□□□ 0.32
TTC27Q6P3X3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 SCARNA2-201ENST00000458748 420 ntBASIC17.05■□□□□ 0.32
TTC27Q6P3X3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 AC006557.2-201ENST00000592985 1240 ntBASIC17.05■□□□□ 0.32
TTC27Q6P3X3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 AP001350.2-201ENST00000625104 1094 ntBASIC17.05■□□□□ 0.32
TTC27Q6P3X3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TTC27Q6P3X3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.04■□□□□ 0.32
TTC27Q6P3X3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TTC27Q6P3X3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TTC27Q6P3X3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TTC27Q6P3X3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TTC27Q6P3X3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms