Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC96Q2M329 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC96Q2M329 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC96Q2M329 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC96Q2M329 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
CCDC96Q2M329 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC96Q2M329 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC96Q2M329 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC96Q2M329 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC96Q2M329 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC96Q2M329 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC96Q2M329 AC067863.1-201ENST00000494933 530 ntBASIC19.22■□□□□ 0.67
CCDC96Q2M329 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC96Q2M329 AC069262.1-201ENST00000539058 672 ntBASIC19.22■□□□□ 0.67
CCDC96Q2M329 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC96Q2M329 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC96Q2M329 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC96Q2M329 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC96Q2M329 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC96Q2M329 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CCDC96Q2M329 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC96Q2M329 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC96Q2M329 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC96Q2M329 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC96Q2M329 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC96Q2M329 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC96Q2M329 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC96Q2M329 AL031731.1-201ENST00000642131 2094 ntBASIC19.21■□□□□ 0.67
CCDC96Q2M329 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC96Q2M329 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CCDC96Q2M329 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC96Q2M329 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC96Q2M329 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC96Q2M329 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC96Q2M329 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC96Q2M329 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC96Q2M329 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CCDC96Q2M329 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC96Q2M329 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC96Q2M329 AC008677.1-201ENST00000519230 1561 ntBASIC19.21■□□□□ 0.67
CCDC96Q2M329 AL512356.2-201ENST00000546955 174 ntBASIC19.21■□□□□ 0.67
CCDC96Q2M329 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC96Q2M329 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC96Q2M329 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC96Q2M329 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC96Q2M329 AC073389.1-201ENST00000595595 795 ntBASIC19.21■□□□□ 0.67
CCDC96Q2M329 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC96Q2M329 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC96Q2M329 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC96Q2M329 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC96Q2M329 TUBB3P1-201ENST00000405796 1332 ntBASIC19.21■□□□□ 0.67
CCDC96Q2M329 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC96Q2M329 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC96Q2M329 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC96Q2M329 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC96Q2M329 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC96Q2M329 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CCDC96Q2M329 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC96Q2M329 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC96Q2M329 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC96Q2M329 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC96Q2M329 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC96Q2M329 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC96Q2M329 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC96Q2M329 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC96Q2M329 AC006538.1-201ENST00000567905 1585 ntBASIC19.2■□□□□ 0.66
CCDC96Q2M329 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC96Q2M329 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC96Q2M329 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC96Q2M329 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC96Q2M329 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC96Q2M329 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC96Q2M329 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC96Q2M329 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC96Q2M329 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC96Q2M329 MIR770-201ENST00000390219 98 ntBASIC19.2■□□□□ 0.66
CCDC96Q2M329 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC96Q2M329 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.2■□□□□ 0.66
CCDC96Q2M329 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC96Q2M329 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC96Q2M329 SPDYE7P-202ENST00000420373 878 ntBASIC19.2■□□□□ 0.66
CCDC96Q2M329 AC125807.1-201ENST00000483097 614 ntBASIC19.2■□□□□ 0.66
CCDC96Q2M329 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.2■□□□□ 0.66
CCDC96Q2M329 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC96Q2M329 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC96Q2M329 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC96Q2M329 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC96Q2M329 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC96Q2M329 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC96Q2M329 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC96Q2M329 AC124067.4-201ENST00000519691 2379 ntBASIC19.2■□□□□ 0.66
CCDC96Q2M329 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.2■□□□□ 0.66
CCDC96Q2M329 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC96Q2M329 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CCDC96Q2M329 NKILA-202ENST00000614771 2598 ntBASIC19.2■□□□□ 0.66
CCDC96Q2M329 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC96Q2M329 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC96Q2M329 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC96Q2M329 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC96Q2M329 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms