Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PCCBP05166 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCCBP05166 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.33■□□□□ 0.21
PCCBP05166 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.33■□□□□ 0.21
PCCBP05166 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCCBP05166 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCCBP05166 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCCBP05166 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.21
PCCBP05166 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PCCBP05166 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.33■□□□□ 0.2
PCCBP05166 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCCBP05166 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCCBP05166 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCCBP05166 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCCBP05166 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCCBP05166 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCCBP05166 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCCBP05166 AC107890.1-201ENST00000422478 521 ntBASIC16.33■□□□□ 0.2
PCCBP05166 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.33■□□□□ 0.2
PCCBP05166 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.33■□□□□ 0.2
PCCBP05166 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.33■□□□□ 0.2
PCCBP05166 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.33■□□□□ 0.2
PCCBP05166 AC051619.7-201ENST00000568314 623 ntBASIC16.33■□□□□ 0.2
PCCBP05166 MIR4453-201ENST00000584019 89 ntBASIC16.33■□□□□ 0.2
PCCBP05166 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.33■□□□□ 0.2
PCCBP05166 AC003101.2-201ENST00000612557 442 ntBASIC16.33■□□□□ 0.2
PCCBP05166 SPTSSB-204ENST00000617024 1292 ntBASIC16.33■□□□□ 0.2
PCCBP05166 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCCBP05166 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
PCCBP05166 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCCBP05166 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCCBP05166 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCCBP05166 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.33■□□□□ 0.2
PCCBP05166 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCCBP05166 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
PCCBP05166 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCCBP05166 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCCBP05166 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.33■□□□□ 0.2
PCCBP05166 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
PCCBP05166 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
PCCBP05166 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.33■□□□□ 0.2
PCCBP05166 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCCBP05166 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.33■□□□□ 0.2
PCCBP05166 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCCBP05166 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCCBP05166 AC106886.4-201ENST00000623557 2502 ntBASIC16.33■□□□□ 0.2
PCCBP05166 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCCBP05166 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCCBP05166 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCCBP05166 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCCBP05166 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCCBP05166 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCCBP05166 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCCBP05166 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCCBP05166 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCCBP05166 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCCBP05166 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCCBP05166 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.32■□□□□ 0.2
PCCBP05166 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCCBP05166 MIR943-201ENST00000401286 94 ntBASIC16.32■□□□□ 0.2
PCCBP05166 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.32■□□□□ 0.2
PCCBP05166 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.32■□□□□ 0.2
PCCBP05166 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCCBP05166 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.32■□□□□ 0.2
PCCBP05166 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.32■□□□□ 0.2
PCCBP05166 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.32■□□□□ 0.2
PCCBP05166 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.32■□□□□ 0.2
PCCBP05166 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.32■□□□□ 0.2
PCCBP05166 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCCBP05166 AC005498.2-205ENST00000593218 784 ntBASIC16.32■□□□□ 0.2
PCCBP05166 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.32■□□□□ 0.2
PCCBP05166 AC011467.4-201ENST00000594891 528 ntBASIC16.32■□□□□ 0.2
PCCBP05166 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCCBP05166 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCCBP05166 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCCBP05166 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.31■□□□□ 0.2
PCCBP05166 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.31■□□□□ 0.2
PCCBP05166 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PCCBP05166 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCCBP05166 PCGF3-213ENST00000620529 1899 ntBASIC16.31■□□□□ 0.2
PCCBP05166 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCCBP05166 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.31■□□□□ 0.2
PCCBP05166 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCCBP05166 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
PCCBP05166 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCCBP05166 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.31■□□□□ 0.2
PCCBP05166 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCCBP05166 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.31■□□□□ 0.2
PCCBP05166 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCCBP05166 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCCBP05166 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCCBP05166 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCCBP05166 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCCBP05166 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCCBP05166 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
PCCBP05166 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCCBP05166 HLA-H-201ENST00000383620 1096 ntBASIC16.31■□□□□ 0.2
PCCBP05166 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.31■□□□□ 0.2
PCCBP05166 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.31■□□□□ 0.2
PCCBP05166 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms