Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHF1O43189 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHF1O43189 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PHF1O43189 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.36□□□□□ -0.11
PHF1O43189 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHF1O43189 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PHF1O43189 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PHF1O43189 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.36□□□□□ -0.11
PHF1O43189 CEND1P1-201ENST00000451006 455 ntBASIC14.36□□□□□ -0.11
PHF1O43189 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.36□□□□□ -0.11
PHF1O43189 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.36□□□□□ -0.11
PHF1O43189 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.36□□□□□ -0.11
PHF1O43189 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.36□□□□□ -0.11
PHF1O43189 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.36□□□□□ -0.11
PHF1O43189 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.36□□□□□ -0.11
PHF1O43189 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.36□□□□□ -0.11
PHF1O43189 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHF1O43189 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PHF1O43189 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.36□□□□□ -0.11
PHF1O43189 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHF1O43189 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
PHF1O43189 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHF1O43189 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PHF1O43189 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PHF1O43189 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHF1O43189 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHF1O43189 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PHF1O43189 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
PHF1O43189 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
PHF1O43189 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.35□□□□□ -0.11
PHF1O43189 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PHF1O43189 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PHF1O43189 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PHF1O43189 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PHF1O43189 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
PHF1O43189 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PHF1O43189 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.35□□□□□ -0.11
PHF1O43189 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PHF1O43189 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PHF1O43189 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PHF1O43189 PCDHA1-201ENST00000378133 2726 ntBASIC14.35□□□□□ -0.11
PHF1O43189 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PHF1O43189 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PHF1O43189 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PHF1O43189 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.35□□□□□ -0.11
PHF1O43189 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PHF1O43189 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.35□□□□□ -0.11
PHF1O43189 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.35□□□□□ -0.11
PHF1O43189 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
PHF1O43189 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.35□□□□□ -0.11
PHF1O43189 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.35□□□□□ -0.11
PHF1O43189 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PHF1O43189 RPS15P9-201ENST00000494093 319 ntBASIC14.35□□□□□ -0.11
PHF1O43189 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PHF1O43189 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
PHF1O43189 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.35□□□□□ -0.11
PHF1O43189 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.35□□□□□ -0.11
PHF1O43189 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PHF1O43189 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.35□□□□□ -0.11
PHF1O43189 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PHF1O43189 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PHF1O43189 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PHF1O43189 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PHF1O43189 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PHF1O43189 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
PHF1O43189 AC006449.5-201ENST00000610658 2098 ntBASIC14.35□□□□□ -0.11
PHF1O43189 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PHF1O43189 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PHF1O43189 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PHF1O43189 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PHF1O43189 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PHF1O43189 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PHF1O43189 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.35□□□□□ -0.11
PHF1O43189 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.35□□□□□ -0.11
PHF1O43189 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PHF1O43189 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.35□□□□□ -0.11
PHF1O43189 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PHF1O43189 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PHF1O43189 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.35□□□□□ -0.11
PHF1O43189 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PHF1O43189 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.34□□□□□ -0.11
PHF1O43189 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF1O43189 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF1O43189 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.34□□□□□ -0.11
PHF1O43189 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PHF1O43189 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PHF1O43189 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PHF1O43189 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF1O43189 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF1O43189 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF1O43189 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF1O43189 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF1O43189 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.34□□□□□ -0.11
PHF1O43189 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF1O43189 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF1O43189 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PHF1O43189 MKNK2P1-201ENST00000437526 628 ntBASIC14.34□□□□□ -0.11
PHF1O43189 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.34□□□□□ -0.11
PHF1O43189 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.34□□□□□ -0.11
PHF1O43189 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms