Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 KRT8P37-201ENST00000451609 1420 ntBASIC17.35■□□□□ 0.37
SOX1O00570 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SOX1O00570 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SOX1O00570 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX1O00570 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.35■□□□□ 0.37
SOX1O00570 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX1O00570 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.35■□□□□ 0.37
SOX1O00570 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX1O00570 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.35■□□□□ 0.37
SOX1O00570 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.35■□□□□ 0.37
SOX1O00570 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX1O00570 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX1O00570 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX1O00570 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SOX1O00570 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SOX1O00570 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SOX1O00570 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.34■□□□□ 0.37
SOX1O00570 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SOX1O00570 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SOX1O00570 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SOX1O00570 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.34■□□□□ 0.37
SOX1O00570 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SOX1O00570 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.34■□□□□ 0.37
SOX1O00570 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SOX1O00570 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SOX1O00570 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.34■□□□□ 0.37
SOX1O00570 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC17.34■□□□□ 0.37
SOX1O00570 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.34■□□□□ 0.37
SOX1O00570 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SOX1O00570 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.34■□□□□ 0.37
SOX1O00570 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SOX1O00570 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.34■□□□□ 0.37
SOX1O00570 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SOX1O00570 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SOX1O00570 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SOX1O00570 AC134698.3-201ENST00000523880 214 ntBASIC17.34■□□□□ 0.37
SOX1O00570 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SOX1O00570 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.34■□□□□ 0.37
SOX1O00570 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SOX1O00570 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.34■□□□□ 0.37
SOX1O00570 PRKXP1-201ENST00000561423 1122 ntBASIC17.34■□□□□ 0.37
SOX1O00570 MIR3147-201ENST00000577811 66 ntBASIC17.34■□□□□ 0.37
SOX1O00570 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.34■□□□□ 0.37
SOX1O00570 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.34■□□□□ 0.37
SOX1O00570 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.34■□□□□ 0.37
SOX1O00570 AC006480.2-201ENST00000609770 1337 ntBASIC17.34■□□□□ 0.37
SOX1O00570 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.34■□□□□ 0.37
SOX1O00570 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.34■□□□□ 0.37
SOX1O00570 AC079336.7-201ENST00000623428 1078 ntBASIC17.34■□□□□ 0.37
SOX1O00570 AC090340.1-201ENST00000620778 4980 ntBASIC17.34■□□□□ 0.37
SOX1O00570 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SOX1O00570 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SOX1O00570 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.33■□□□□ 0.37
SOX1O00570 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
SOX1O00570 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.33■□□□□ 0.37
SOX1O00570 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SOX1O00570 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SOX1O00570 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SOX1O00570 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
SOX1O00570 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
SOX1O00570 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.33■□□□□ 0.37
SOX1O00570 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SOX1O00570 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SOX1O00570 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SOX1O00570 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SOX1O00570 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.33■□□□□ 0.37
SOX1O00570 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SOX1O00570 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SOX1O00570 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.33■□□□□ 0.36
SOX1O00570 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SOX1O00570 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SOX1O00570 KRT8P49-201ENST00000604166 1432 ntBASIC17.33■□□□□ 0.36
SOX1O00570 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SOX1O00570 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC17.33■□□□□ 0.36
SOX1O00570 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SOX1O00570 CNN2P8-201ENST00000421872 913 ntBASIC17.33■□□□□ 0.36
SOX1O00570 HIST3H2BA-201ENST00000436555 524 ntBASIC17.33■□□□□ 0.36
SOX1O00570 PTK2-225ENST00000520892 571 ntTSL 4 BASIC17.33■□□□□ 0.36
SOX1O00570 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.33■□□□□ 0.36
SOX1O00570 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
SOX1O00570 FGFR3P5-201ENST00000564496 886 ntBASIC17.33■□□□□ 0.36
SOX1O00570 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.33■□□□□ 0.36
SOX1O00570 AC024267.1-201ENST00000582320 895 ntBASIC17.33■□□□□ 0.36
SOX1O00570 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SOX1O00570 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.33■□□□□ 0.36
SOX1O00570 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.33■□□□□ 0.36
SOX1O00570 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SOX1O00570 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SOX1O00570 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.33■□□□□ 0.36
SOX1O00570 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SOX1O00570 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SOX1O00570 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SOX1O00570 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SOX1O00570 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SOX1O00570 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SOX1O00570 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SOX1O00570 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SOX1O00570 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SOX1O00570 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SOX1O00570 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms