Protein–RNA interactions for Protein: A0A087WVF3

TBC1D3D, TBC1 domain family member 3D, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3DA0A087WVF3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3DA0A087WVF3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.39■□□□□ 0.21
TBC1D3DA0A087WVF3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.39■□□□□ 0.21
TBC1D3DA0A087WVF3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.39■□□□□ 0.21
TBC1D3DA0A087WVF3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.39■□□□□ 0.21
TBC1D3DA0A087WVF3 RN7SL828P-201ENST00000607615 303 ntBASIC16.39■□□□□ 0.21
TBC1D3DA0A087WVF3 AL589739.1-201ENST00000607720 493 ntBASIC16.39■□□□□ 0.21
TBC1D3DA0A087WVF3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3DA0A087WVF3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.39■□□□□ 0.21
TBC1D3DA0A087WVF3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
TBC1D3DA0A087WVF3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TBC1D3DA0A087WVF3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3DA0A087WVF3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3DA0A087WVF3 AL645608.8-201ENST00000606034 2086 ntBASIC16.39■□□□□ 0.21
TBC1D3DA0A087WVF3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.39■□□□□ 0.21
TBC1D3DA0A087WVF3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.39■□□□□ 0.21
TBC1D3DA0A087WVF3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3DA0A087WVF3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3DA0A087WVF3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 HLA-V-204ENST00000476601 1289 ntBASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 CETN4P-206ENST00000642099 2168 ntBASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 GPAA1P2-202ENST00000606848 1787 ntBASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3DA0A087WVF3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 AC105021.1-202ENST00000570572 669 ntBASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 AL031731.1-201ENST00000642131 2094 ntBASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 AL603756.1-201ENST00000606511 2163 ntBASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3DA0A087WVF3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TBC1D3DA0A087WVF3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TBC1D3DA0A087WVF3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms