Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 AL358472.4-201ENST00000633140 710 ntBASIC16.12■□□□□ 0.17
PCDHGB4Q9UN71 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGB4Q9UN71 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB4Q9UN71 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB4Q9UN71 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGB4Q9UN71 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGB4Q9UN71 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGB4Q9UN71 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PCDHGB4Q9UN71 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB4Q9UN71 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PCDHGB4Q9UN71 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB4Q9UN71 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB4Q9UN71 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB4Q9UN71 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB4Q9UN71 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB4Q9UN71 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PCDHGB4Q9UN71 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 LINC00982-205ENST00000420957 435 ntBASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 AC079776.2-201ENST00000641154 1609 ntBASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB4Q9UN71 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 TNRC18P2-201ENST00000417666 2714 ntBASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 ATP5G2P1-201ENST00000433580 426 ntBASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 AC092119.3-201ENST00000612618 583 ntBASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 NPAP1P7-201ENST00000613027 823 ntBASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB4Q9UN71 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms