Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLK4Q9HAZ1 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 AC009947.1-201ENST00000444350 727 ntBASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 RPL13AP23-201ENST00000480739 586 ntBASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 AC108751.1-201ENST00000490852 363 ntBASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 AC010654.1-201ENST00000615722 808 ntBASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 AC129492.6-201ENST00000611383 1305 ntBASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLK4Q9HAZ1 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 AC092384.3-202ENST00000564646 2873 ntBASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 AC106730.1-201ENST00000566722 1090 ntBASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.15■□□□□ 0.18
CLK4Q9HAZ1 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms