Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 AC022532.1-201ENST00000624563 1728 ntBASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 AL645929.1-201ENST00000420084 975 ntBASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 VENTXP7-201ENST00000475503 772 ntBASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3IL1Q8TBN0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 SBF1P1-201ENST00000444527 5631 ntBASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 AC083849.1-201ENST00000615227 514 ntBASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB3IL1Q8TBN0 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IL1Q8TBN0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RAB3IL1Q8TBN0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IL1Q8TBN0 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IL1Q8TBN0 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IL1Q8TBN0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IL1Q8TBN0 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB3IL1Q8TBN0 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RAB3IL1Q8TBN0 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB3IL1Q8TBN0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB3IL1Q8TBN0 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IL1Q8TBN0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IL1Q8TBN0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IL1Q8TBN0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IL1Q8TBN0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms