Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 AC092171.3-201ENST00000610122 2651 ntBASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 LINC02199-201ENST00000506655 2702 ntBASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 AL162727.3-201ENST00000635661 2787 ntBASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 MIR770-201ENST00000390219 98 ntBASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 COX5BP2-201ENST00000392354 334 ntBASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 CNN2P11-201ENST00000429351 262 ntBASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 YBX1P5-201ENST00000509441 847 ntBASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 AL022326.1-202ENST00000641533 845 ntBASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.56□□□□□ -0.08
CHRFAM7AQ494W8 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms