Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
GDF1P27539 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
GDF1P27539 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
GDF1P27539 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.99□□□□□ -0.01
GDF1P27539 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
GDF1P27539 CNN2P2-201ENST00000443536 909 ntBASIC14.99□□□□□ -0.01
GDF1P27539 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
GDF1P27539 CNN2P3-201ENST00000450201 906 ntBASIC14.99□□□□□ -0.01
GDF1P27539 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GDF1P27539 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
GDF1P27539 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.99□□□□□ -0.01
GDF1P27539 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
GDF1P27539 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.99□□□□□ -0.01
GDF1P27539 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.99□□□□□ -0.01
GDF1P27539 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.99□□□□□ -0.01
GDF1P27539 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.99□□□□□ -0.01
GDF1P27539 AC020765.3-201ENST00000613051 740 ntBASIC14.99□□□□□ -0.01
GDF1P27539 AL136317.3-201ENST00000618497 906 ntBASIC14.99□□□□□ -0.01
GDF1P27539 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
GDF1P27539 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GDF1P27539 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
GDF1P27539 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GDF1P27539 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
GDF1P27539 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GDF1P27539 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GDF1P27539 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
GDF1P27539 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.99□□□□□ -0.01
GDF1P27539 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
GDF1P27539 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
GDF1P27539 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
GDF1P27539 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDF1P27539 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDF1P27539 AC006538.1-201ENST00000567905 1585 ntBASIC14.98□□□□□ -0.01
GDF1P27539 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
GDF1P27539 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.98□□□□□ -0.01
GDF1P27539 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.98□□□□□ -0.01
GDF1P27539 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDF1P27539 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GDF1P27539 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.98□□□□□ -0.01
GDF1P27539 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
GDF1P27539 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GDF1P27539 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.98□□□□□ -0.01
GDF1P27539 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDF1P27539 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GDF1P27539 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
GDF1P27539 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
GDF1P27539 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDF1P27539 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDF1P27539 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.98□□□□□ -0.01
GDF1P27539 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.98□□□□□ -0.01
GDF1P27539 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.98□□□□□ -0.01
GDF1P27539 GPS2P2-201ENST00000430745 888 ntBASIC14.98□□□□□ -0.01
GDF1P27539 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.98□□□□□ -0.01
GDF1P27539 HLA-J-202ENST00000469281 1241 ntBASIC14.98□□□□□ -0.01
GDF1P27539 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.98□□□□□ -0.01
GDF1P27539 AC067863.1-201ENST00000494933 530 ntBASIC14.98□□□□□ -0.01
GDF1P27539 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
GDF1P27539 ALG1L8P-201ENST00000533887 760 ntBASIC14.98□□□□□ -0.01
GDF1P27539 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDF1P27539 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
GDF1P27539 MIR6080-201ENST00000617359 66 ntBASIC14.98□□□□□ -0.01
GDF1P27539 AP001059.3-201ENST00000619053 235 ntBASIC14.98□□□□□ -0.01
GDF1P27539 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
GDF1P27539 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GDF1P27539 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.98□□□□□ -0.01
GDF1P27539 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
GDF1P27539 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
GDF1P27539 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDF1P27539 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
GDF1P27539 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
GDF1P27539 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDF1P27539 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDF1P27539 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDF1P27539 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GDF1P27539 AC073439.1-201ENST00000624121 1774 ntBASIC14.98□□□□□ -0.01
GDF1P27539 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDF1P27539 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDF1P27539 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDF1P27539 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
GDF1P27539 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
GDF1P27539 AL031731.1-201ENST00000642131 2094 ntBASIC14.97□□□□□ -0.01
GDF1P27539 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GDF1P27539 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDF1P27539 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDF1P27539 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDF1P27539 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GDF1P27539 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDF1P27539 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDF1P27539 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
GDF1P27539 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GDF1P27539 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDF1P27539 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
GDF1P27539 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDF1P27539 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GDF1P27539 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDF1P27539 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GDF1P27539 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GDF1P27539 MIR346-201ENST00000362234 95 ntBASIC14.97□□□□□ -0.01
GDF1P27539 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GDF1P27539 SPDYE7P-202ENST00000420373 878 ntBASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms