Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN1P18031 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PTPN1P18031 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN1P18031 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPN1P18031 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN1P18031 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN1P18031 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN1P18031 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN1P18031 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPN1P18031 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN1P18031 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN1P18031 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.48■□□□□ 0.39
PTPN1P18031 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN1P18031 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN1P18031 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN1P18031 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN1P18031 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN1P18031 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN1P18031 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
PTPN1P18031 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN1P18031 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.48■□□□□ 0.39
PTPN1P18031 AC093724.1-201ENST00000448659 1027 ntBASIC17.48■□□□□ 0.39
PTPN1P18031 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.48■□□□□ 0.39
PTPN1P18031 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.48■□□□□ 0.39
PTPN1P18031 AC025678.2-201ENST00000562061 970 ntBASIC17.48■□□□□ 0.39
PTPN1P18031 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN1P18031 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN1P18031 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.48■□□□□ 0.39
PTPN1P18031 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN1P18031 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN1P18031 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.48■□□□□ 0.39
PTPN1P18031 NKILA-202ENST00000614771 2598 ntBASIC17.48■□□□□ 0.39
PTPN1P18031 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PTPN1P18031 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.48■□□□□ 0.39
PTPN1P18031 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN1P18031 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
PTPN1P18031 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN1P18031 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN1P18031 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN1P18031 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PTPN1P18031 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN1P18031 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PTPN1P18031 LINC01144-201ENST00000626198 1710 ntBASIC17.47■□□□□ 0.39
PTPN1P18031 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN1P18031 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN1P18031 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN1P18031 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN1P18031 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN1P18031 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PTPN1P18031 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN1P18031 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN1P18031 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
PTPN1P18031 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN1P18031 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN1P18031 ALG1L8P-201ENST00000533887 760 ntBASIC17.47■□□□□ 0.39
PTPN1P18031 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN1P18031 AC026150.2-201ENST00000564693 1156 ntBASIC17.47■□□□□ 0.39
PTPN1P18031 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN1P18031 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN1P18031 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.47■□□□□ 0.39
PTPN1P18031 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN1P18031 SPTSSB-204ENST00000617024 1292 ntBASIC17.47■□□□□ 0.39
PTPN1P18031 AP001059.3-201ENST00000619053 235 ntBASIC17.47■□□□□ 0.39
PTPN1P18031 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.47■□□□□ 0.39
PTPN1P18031 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN1P18031 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN1P18031 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN1P18031 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN1P18031 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PTPN1P18031 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN1P18031 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN1P18031 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PTPN1P18031 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN1P18031 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN1P18031 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN1P18031 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PTPN1P18031 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN1P18031 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN1P18031 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.47■□□□□ 0.39
PTPN1P18031 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN1P18031 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PTPN1P18031 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN1P18031 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PTPN1P18031 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
PTPN1P18031 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN1P18031 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN1P18031 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN1P18031 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.47■□□□□ 0.39
PTPN1P18031 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN1P18031 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN1P18031 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN1P18031 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.46■□□□□ 0.39
PTPN1P18031 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PTPN1P18031 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN1P18031 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN1P18031 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
PTPN1P18031 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN1P18031 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PTPN1P18031 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.46■□□□□ 0.39
PTPN1P18031 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms