Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.32■□□□□ 0.04
LGI1O95970 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LGI1O95970 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LGI1O95970 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LGI1O95970 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.32■□□□□ 0.04
LGI1O95970 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LGI1O95970 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LGI1O95970 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LGI1O95970 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LGI1O95970 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LGI1O95970 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LGI1O95970 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LGI1O95970 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.32■□□□□ 0.04
LGI1O95970 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.32■□□□□ 0.04
LGI1O95970 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LGI1O95970 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.31■□□□□ 0.04
LGI1O95970 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LGI1O95970 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LGI1O95970 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LGI1O95970 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.31■□□□□ 0.04
LGI1O95970 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LGI1O95970 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LGI1O95970 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.31■□□□□ 0.04
LGI1O95970 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.31■□□□□ 0.04
LGI1O95970 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LGI1O95970 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LGI1O95970 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LGI1O95970 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LGI1O95970 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LGI1O95970 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LGI1O95970 AC073648.2-201ENST00000510116 352 ntBASIC15.31■□□□□ 0.04
LGI1O95970 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.31■□□□□ 0.04
LGI1O95970 AP002469.2-201ENST00000531724 424 ntBASIC15.31■□□□□ 0.04
LGI1O95970 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.31■□□□□ 0.04
LGI1O95970 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.31■□□□□ 0.04
LGI1O95970 AL160237.2-201ENST00000556165 472 ntBASIC15.31■□□□□ 0.04
LGI1O95970 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.31■□□□□ 0.04
LGI1O95970 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.31■□□□□ 0.04
LGI1O95970 AC020765.3-201ENST00000613051 740 ntBASIC15.31■□□□□ 0.04
LGI1O95970 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.31■□□□□ 0.04
LGI1O95970 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LGI1O95970 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LGI1O95970 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.31■□□□□ 0.04
LGI1O95970 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.31■□□□□ 0.04
LGI1O95970 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.31■□□□□ 0.04
LGI1O95970 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LGI1O95970 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LGI1O95970 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LGI1O95970 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.31■□□□□ 0.04
LGI1O95970 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LGI1O95970 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LGI1O95970 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LGI1O95970 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LGI1O95970 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LGI1O95970 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LGI1O95970 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.31■□□□□ 0.04
LGI1O95970 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LGI1O95970 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.31■□□□□ 0.04
LGI1O95970 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LGI1O95970 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LGI1O95970 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LGI1O95970 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LGI1O95970 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LGI1O95970 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LGI1O95970 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LGI1O95970 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LGI1O95970 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LGI1O95970 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LGI1O95970 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LGI1O95970 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
LGI1O95970 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LGI1O95970 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.3■□□□□ 0.04
LGI1O95970 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
LGI1O95970 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LGI1O95970 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LGI1O95970 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.3■□□□□ 0.04
LGI1O95970 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.3■□□□□ 0.04
LGI1O95970 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LGI1O95970 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LGI1O95970 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.3■□□□□ 0.04
LGI1O95970 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LGI1O95970 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.3■□□□□ 0.04
LGI1O95970 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.3■□□□□ 0.04
LGI1O95970 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.3■□□□□ 0.04
LGI1O95970 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.3■□□□□ 0.04
LGI1O95970 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.3■□□□□ 0.04
LGI1O95970 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.3■□□□□ 0.04
LGI1O95970 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.3■□□□□ 0.04
LGI1O95970 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.3■□□□□ 0.04
LGI1O95970 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.3■□□□□ 0.04
LGI1O95970 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
LGI1O95970 RNPS1P1-201ENST00000507437 918 ntBASIC15.3■□□□□ 0.04
LGI1O95970 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
LGI1O95970 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.3■□□□□ 0.04
LGI1O95970 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.3■□□□□ 0.04
LGI1O95970 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.3■□□□□ 0.04
LGI1O95970 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.3■□□□□ 0.04
LGI1O95970 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.3■□□□□ 0.04
LGI1O95970 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.3■□□□□ 0.04
LGI1O95970 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms