Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP2AO43633 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.59■□□□□ 0.57
CHMP2AO43633 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.59■□□□□ 0.57
CHMP2AO43633 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP2AO43633 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.59■□□□□ 0.57
CHMP2AO43633 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.59■□□□□ 0.57
CHMP2AO43633 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CHMP2AO43633 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP2AO43633 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP2AO43633 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP2AO43633 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CHMP2AO43633 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.59■□□□□ 0.57
CHMP2AO43633 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.59■□□□□ 0.57
CHMP2AO43633 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.59■□□□□ 0.57
CHMP2AO43633 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP2AO43633 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP2AO43633 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CHMP2AO43633 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.58■□□□□ 0.57
CHMP2AO43633 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP2AO43633 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP2AO43633 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP2AO43633 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP2AO43633 AC073439.1-201ENST00000624121 1774 ntBASIC18.58■□□□□ 0.57
CHMP2AO43633 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CHMP2AO43633 AC005052.1-201ENST00000625181 2492 ntBASIC18.58■□□□□ 0.57
CHMP2AO43633 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP2AO43633 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP2AO43633 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP2AO43633 AC009053.2-201ENST00000563701 2365 ntBASIC18.58■□□□□ 0.56
CHMP2AO43633 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.58■□□□□ 0.56
CHMP2AO43633 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.58■□□□□ 0.56
CHMP2AO43633 PMS2P2-201ENST00000425039 1128 ntBASIC18.58■□□□□ 0.56
CHMP2AO43633 PRYP6-201ENST00000514804 343 ntBASIC18.58■□□□□ 0.56
CHMP2AO43633 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.58■□□□□ 0.56
CHMP2AO43633 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.58■□□□□ 0.56
CHMP2AO43633 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.58■□□□□ 0.56
CHMP2AO43633 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP2AO43633 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP2AO43633 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.58■□□□□ 0.56
CHMP2AO43633 AC009093.7-201ENST00000623853 1223 ntBASIC18.58■□□□□ 0.56
CHMP2AO43633 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP2AO43633 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
CHMP2AO43633 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP2AO43633 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.58■□□□□ 0.56
CHMP2AO43633 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CHMP2AO43633 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP2AO43633 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CHMP2AO43633 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CHMP2AO43633 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP2AO43633 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP2AO43633 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP2AO43633 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP2AO43633 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP2AO43633 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CHMP2AO43633 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP2AO43633 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP2AO43633 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP2AO43633 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP2AO43633 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP2AO43633 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP2AO43633 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP2AO43633 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP2AO43633 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.57■□□□□ 0.56
CHMP2AO43633 AC109322.1-201ENST00000524499 1264 ntBASIC18.57■□□□□ 0.56
CHMP2AO43633 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.57■□□□□ 0.56
CHMP2AO43633 AP000842.3-202ENST00000569238 1080 ntBASIC18.57■□□□□ 0.56
CHMP2AO43633 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.57■□□□□ 0.56
CHMP2AO43633 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.57■□□□□ 0.56
CHMP2AO43633 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP2AO43633 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP2AO43633 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
CHMP2AO43633 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP2AO43633 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CHMP2AO43633 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CHMP2AO43633 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.57■□□□□ 0.56
CHMP2AO43633 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.57■□□□□ 0.56
CHMP2AO43633 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CHMP2AO43633 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP2AO43633 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP2AO43633 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP2AO43633 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CHMP2AO43633 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP2AO43633 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP2AO43633 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2AO43633 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2AO43633 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CHMP2AO43633 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP2AO43633 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP2AO43633 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.56■□□□□ 0.56
CHMP2AO43633 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2AO43633 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP2AO43633 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.56■□□□□ 0.56
CHMP2AO43633 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2AO43633 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2AO43633 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2AO43633 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2AO43633 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2AO43633 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2AO43633 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.56■□□□□ 0.56
CHMP2AO43633 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms