Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.26□□□□□ -0.13
LYRM1O43325 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LYRM1O43325 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.26□□□□□ -0.13
LYRM1O43325 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LYRM1O43325 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.26□□□□□ -0.13
LYRM1O43325 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.26□□□□□ -0.13
LYRM1O43325 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC14.26□□□□□ -0.13
LYRM1O43325 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 RNA5SP413-201ENST00000516373 109 ntBASIC14.26□□□□□ -0.13
LYRM1O43325 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.26□□□□□ -0.13
LYRM1O43325 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.26□□□□□ -0.13
LYRM1O43325 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 AC116562.4-202ENST00000641738 218 ntBASIC14.26□□□□□ -0.13
LYRM1O43325 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
LYRM1O43325 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.26□□□□□ -0.13
LYRM1O43325 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LYRM1O43325 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.26□□□□□ -0.13
LYRM1O43325 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.26□□□□□ -0.13
LYRM1O43325 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.26□□□□□ -0.13
LYRM1O43325 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LYRM1O43325 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.26□□□□□ -0.13
LYRM1O43325 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LYRM1O43325 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYRM1O43325 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.25□□□□□ -0.13
LYRM1O43325 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LYRM1O43325 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LYRM1O43325 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYRM1O43325 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.25□□□□□ -0.13
LYRM1O43325 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.25□□□□□ -0.13
LYRM1O43325 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYRM1O43325 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LYRM1O43325 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYRM1O43325 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.25□□□□□ -0.13
LYRM1O43325 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LYRM1O43325 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.25□□□□□ -0.13
LYRM1O43325 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYRM1O43325 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LYRM1O43325 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYRM1O43325 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYRM1O43325 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.25□□□□□ -0.13
LYRM1O43325 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYRM1O43325 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LYRM1O43325 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYRM1O43325 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.25□□□□□ -0.13
LYRM1O43325 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.25□□□□□ -0.13
LYRM1O43325 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LYRM1O43325 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LYRM1O43325 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.25□□□□□ -0.13
LYRM1O43325 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LYRM1O43325 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.25□□□□□ -0.13
LYRM1O43325 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYRM1O43325 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYRM1O43325 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LYRM1O43325 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LYRM1O43325 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LYRM1O43325 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LYRM1O43325 POU5F1P6-201ENST00000466990 990 ntBASIC14.25□□□□□ -0.13
LYRM1O43325 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LYRM1O43325 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
LYRM1O43325 AC142086.2-201ENST00000569753 217 ntBASIC14.25□□□□□ -0.13
LYRM1O43325 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.25□□□□□ -0.13
LYRM1O43325 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.25□□□□□ -0.13
LYRM1O43325 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.25□□□□□ -0.13
LYRM1O43325 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYRM1O43325 AP003680.1-201ENST00000598970 3660 ntBASIC14.25□□□□□ -0.13
LYRM1O43325 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYRM1O43325 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYRM1O43325 AC009336.1-201ENST00000608941 1553 ntBASIC14.25□□□□□ -0.13
LYRM1O43325 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
LYRM1O43325 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYRM1O43325 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYRM1O43325 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYRM1O43325 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LYRM1O43325 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYRM1O43325 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms