Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 PCDHA14-201ENST00000506751 2298 ntBASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 RNU1-129P-201ENST00000384064 167 ntBASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 MIR661-201ENST00000384842 89 ntBASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 AP000842.3-202ENST00000569238 1080 ntBASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 U1.21-201ENST00000580816 167 ntBASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 LINC02560-201ENST00000596379 459 ntBASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA9Q9Y5G4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 MIR346-201ENST00000362234 95 ntBASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 UGT1A2P-201ENST00000454886 866 ntBASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 AC097493.3-201ENST00000509725 367 ntBASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 AL031055.1-201ENST00000606362 631 ntBASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGA9Q9Y5G4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 PCDH8P1-201ENST00000428983 2773 ntBASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms