Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 CXCL1P1-201ENST00000502804 216 ntBASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 CYP2T1P-202ENST00000641596 2535 ntBASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NCKIPSDQ9NZQ3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 AL645939.2-201ENST00000427340 991 ntBASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 OR7E47P-204ENST00000575924 449 ntBASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 AC025580.3-201ENST00000617932 1424 ntBASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NCKIPSDQ9NZQ3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKIPSDQ9NZQ3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKIPSDQ9NZQ3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
NCKIPSDQ9NZQ3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NCKIPSDQ9NZQ3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKIPSDQ9NZQ3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NCKIPSDQ9NZQ3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.77■□□□□ 0.28
NCKIPSDQ9NZQ3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.77■□□□□ 0.28
NCKIPSDQ9NZQ3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NCKIPSDQ9NZQ3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKIPSDQ9NZQ3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKIPSDQ9NZQ3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKIPSDQ9NZQ3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKIPSDQ9NZQ3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.77■□□□□ 0.28
NCKIPSDQ9NZQ3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKIPSDQ9NZQ3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.77■□□□□ 0.28
NCKIPSDQ9NZQ3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKIPSDQ9NZQ3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKIPSDQ9NZQ3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms