Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.13■□□□□ 0.33
IFT43Q96FT9 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFT43Q96FT9 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.12■□□□□ 0.33
IFT43Q96FT9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.12■□□□□ 0.33
IFT43Q96FT9 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
IFT43Q96FT9 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.12■□□□□ 0.33
IFT43Q96FT9 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.12■□□□□ 0.33
IFT43Q96FT9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.12■□□□□ 0.33
IFT43Q96FT9 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFT43Q96FT9 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.12■□□□□ 0.33
IFT43Q96FT9 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFT43Q96FT9 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFT43Q96FT9 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFT43Q96FT9 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
IFT43Q96FT9 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
IFT43Q96FT9 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
IFT43Q96FT9 AC023274.1-201ENST00000418278 595 ntBASIC17.12■□□□□ 0.33
IFT43Q96FT9 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.12■□□□□ 0.33
IFT43Q96FT9 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.12■□□□□ 0.33
IFT43Q96FT9 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
IFT43Q96FT9 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.12■□□□□ 0.33
IFT43Q96FT9 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.12■□□□□ 0.33
IFT43Q96FT9 KRT18P2-201ENST00000447938 1258 ntBASIC17.12■□□□□ 0.33
IFT43Q96FT9 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.12■□□□□ 0.33
IFT43Q96FT9 SLC25A6P2-201ENST00000497974 877 ntBASIC17.12■□□□□ 0.33
IFT43Q96FT9 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.12■□□□□ 0.33
IFT43Q96FT9 MIR4751-201ENST00000578027 74 ntBASIC17.12■□□□□ 0.33
IFT43Q96FT9 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.12■□□□□ 0.33
IFT43Q96FT9 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.12■□□□□ 0.33
IFT43Q96FT9 AC010654.1-201ENST00000615722 808 ntBASIC17.12■□□□□ 0.33
IFT43Q96FT9 AC004790.2-201ENST00000623588 572 ntBASIC17.12■□□□□ 0.33
IFT43Q96FT9 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFT43Q96FT9 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFT43Q96FT9 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.12■□□□□ 0.33
IFT43Q96FT9 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFT43Q96FT9 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IFT43Q96FT9 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFT43Q96FT9 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFT43Q96FT9 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.12■□□□□ 0.33
IFT43Q96FT9 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
IFT43Q96FT9 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.12■□□□□ 0.33
IFT43Q96FT9 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFT43Q96FT9 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFT43Q96FT9 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFT43Q96FT9 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
IFT43Q96FT9 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
IFT43Q96FT9 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.12■□□□□ 0.33
IFT43Q96FT9 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFT43Q96FT9 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFT43Q96FT9 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFT43Q96FT9 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IFT43Q96FT9 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.12■□□□□ 0.33
IFT43Q96FT9 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.11■□□□□ 0.33
IFT43Q96FT9 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
IFT43Q96FT9 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.11■□□□□ 0.33
IFT43Q96FT9 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
IFT43Q96FT9 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
IFT43Q96FT9 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.11■□□□□ 0.33
IFT43Q96FT9 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
IFT43Q96FT9 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.11■□□□□ 0.33
IFT43Q96FT9 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.11■□□□□ 0.33
IFT43Q96FT9 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.11■□□□□ 0.33
IFT43Q96FT9 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.11■□□□□ 0.33
IFT43Q96FT9 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
IFT43Q96FT9 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.11■□□□□ 0.33
IFT43Q96FT9 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
IFT43Q96FT9 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.11■□□□□ 0.33
IFT43Q96FT9 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFT43Q96FT9 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.11■□□□□ 0.33
IFT43Q96FT9 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms