Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
LCA10Q71F78 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC9.01□□□□□ -0.97
LCA10Q71F78 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
LCA10Q71F78 CYP51A1P1-201ENST00000492267 1507 ntBASIC9□□□□□ -0.97
LCA10Q71F78 AL163051.1-201ENST00000569214 1512 ntBASIC9□□□□□ -0.97
LCA10Q71F78 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC9□□□□□ -0.97
LCA10Q71F78 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
LCA10Q71F78 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC9□□□□□ -0.97
LCA10Q71F78 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC9□□□□□ -0.97
LCA10Q71F78 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
LCA10Q71F78 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC9□□□□□ -0.97
LCA10Q71F78 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
LCA10Q71F78 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC9□□□□□ -0.97
LCA10Q71F78 AC036111.1-201ENST00000533973 1582 ntBASIC9□□□□□ -0.97
LCA10Q71F78 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC9□□□□□ -0.97
LCA10Q71F78 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC9□□□□□ -0.97
LCA10Q71F78 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC9□□□□□ -0.97
LCA10Q71F78 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
LCA10Q71F78 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
LCA10Q71F78 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC9□□□□□ -0.97
LCA10Q71F78 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC9□□□□□ -0.97
LCA10Q71F78 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC9□□□□□ -0.97
LCA10Q71F78 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC9□□□□□ -0.97
LCA10Q71F78 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
LCA10Q71F78 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC9□□□□□ -0.97
LCA10Q71F78 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC9□□□□□ -0.97
LCA10Q71F78 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
LCA10Q71F78 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC9□□□□□ -0.97
LCA10Q71F78 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC9□□□□□ -0.97
LCA10Q71F78 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC9□□□□□ -0.97
LCA10Q71F78 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC9□□□□□ -0.97
LCA10Q71F78 CYGB-204ENST00000589342 815 ntTSL 3 BASIC9□□□□□ -0.97
LCA10Q71F78 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
LCA10Q71F78 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 DGCR10-201ENST00000609839 495 ntBASIC9□□□□□ -0.97
LCA10Q71F78 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC9□□□□□ -0.97
LCA10Q71F78 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC9□□□□□ -0.97
LCA10Q71F78 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 APP-205ENST00000358918 2366 ntTSL 5 BASIC9□□□□□ -0.97
LCA10Q71F78 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
LCA10Q71F78 AC005915.1-201ENST00000624912 2018 ntBASIC9□□□□□ -0.97
LCA10Q71F78 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC9□□□□□ -0.97
LCA10Q71F78 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC9□□□□□ -0.97
LCA10Q71F78 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC9□□□□□ -0.97
LCA10Q71F78 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC9□□□□□ -0.97
LCA10Q71F78 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LCA10Q71F78 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
LCA10Q71F78 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
LCA10Q71F78 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LCA10Q71F78 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC8.99□□□□□ -0.97
LCA10Q71F78 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LCA10Q71F78 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC8.99□□□□□ -0.97
LCA10Q71F78 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
LCA10Q71F78 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
LCA10Q71F78 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
LCA10Q71F78 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
LCA10Q71F78 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
LCA10Q71F78 AC092364.2-201ENST00000596710 2692 ntBASIC8.99□□□□□ -0.97
LCA10Q71F78 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC8.99□□□□□ -0.97
LCA10Q71F78 CCBE1-202ENST00000439986 6227 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LCA10Q71F78 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
LCA10Q71F78 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LCA10Q71F78 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
LCA10Q71F78 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LCA10Q71F78 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
LCA10Q71F78 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC8.99□□□□□ -0.97
LCA10Q71F78 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC8.99□□□□□ -0.97
LCA10Q71F78 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC8.99□□□□□ -0.97
LCA10Q71F78 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LCA10Q71F78 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms