Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK5Q00535 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK5Q00535 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK5Q00535 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK5Q00535 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK5Q00535 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.97□□□□□ -0.01
CDK5Q00535 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK5Q00535 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.97□□□□□ -0.01
CDK5Q00535 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK5Q00535 RBM17P3-201ENST00000417687 1192 ntBASIC14.97□□□□□ -0.01
CDK5Q00535 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.97□□□□□ -0.01
CDK5Q00535 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK5Q00535 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.97□□□□□ -0.01
CDK5Q00535 AL049597.2-201ENST00000565575 961 ntBASIC14.97□□□□□ -0.01
CDK5Q00535 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.97□□□□□ -0.01
CDK5Q00535 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDK5Q00535 PGM5P2-202ENST00000637225 1043 ntBASIC14.97□□□□□ -0.01
CDK5Q00535 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK5Q00535 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK5Q00535 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CDK5Q00535 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDK5Q00535 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.97□□□□□ -0.01
CDK5Q00535 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK5Q00535 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CDK5Q00535 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CDK5Q00535 PI4KAP1-204ENST00000612579 1703 ntBASIC14.97□□□□□ -0.01
CDK5Q00535 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
CDK5Q00535 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CDK5Q00535 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK5Q00535 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK5Q00535 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK5Q00535 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.97□□□□□ -0.01
CDK5Q00535 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.97□□□□□ -0.01
CDK5Q00535 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDK5Q00535 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK5Q00535 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDK5Q00535 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDK5Q00535 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.97□□□□□ -0.01
CDK5Q00535 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDK5Q00535 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDK5Q00535 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDK5Q00535 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CDK5Q00535 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
CDK5Q00535 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDK5Q00535 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDK5Q00535 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDK5Q00535 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDK5Q00535 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDK5Q00535 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.96□□□□□ -0.01
CDK5Q00535 AC073347.1-201ENST00000421633 2643 ntBASIC14.96□□□□□ -0.01
CDK5Q00535 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.96□□□□□ -0.01
CDK5Q00535 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDK5Q00535 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.96□□□□□ -0.01
CDK5Q00535 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.96□□□□□ -0.01
CDK5Q00535 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.96□□□□□ -0.01
CDK5Q00535 AC107918.2-201ENST00000530817 355 ntBASIC14.96□□□□□ -0.01
CDK5Q00535 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.96□□□□□ -0.01
CDK5Q00535 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.96□□□□□ -0.01
CDK5Q00535 AC087641.1-201ENST00000557561 1021 ntBASIC14.96□□□□□ -0.01
CDK5Q00535 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.96□□□□□ -0.01
CDK5Q00535 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.96□□□□□ -0.01
CDK5Q00535 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.96□□□□□ -0.01
CDK5Q00535 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDK5Q00535 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDK5Q00535 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.96□□□□□ -0.01
CDK5Q00535 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CDK5Q00535 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDK5Q00535 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDK5Q00535 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CDK5Q00535 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDK5Q00535 AC016027.1-202ENST00000607927 1699 ntBASIC14.96□□□□□ -0.01
CDK5Q00535 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDK5Q00535 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.96□□□□□ -0.02
CDK5Q00535 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.96□□□□□ -0.02
CDK5Q00535 AC013268.4-201ENST00000637413 2228 ntBASIC14.96□□□□□ -0.02
CDK5Q00535 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.02
CDK5Q00535 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.96□□□□□ -0.02
CDK5Q00535 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDK5Q00535 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDK5Q00535 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
CDK5Q00535 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDK5Q00535 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.95□□□□□ -0.02
CDK5Q00535 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDK5Q00535 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDK5Q00535 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.95□□□□□ -0.02
CDK5Q00535 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDK5Q00535 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
CDK5Q00535 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDK5Q00535 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.95□□□□□ -0.02
CDK5Q00535 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.95□□□□□ -0.02
CDK5Q00535 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.95□□□□□ -0.02
CDK5Q00535 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDK5Q00535 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDK5Q00535 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.95□□□□□ -0.02
CDK5Q00535 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.95□□□□□ -0.02
CDK5Q00535 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDK5Q00535 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.95□□□□□ -0.02
CDK5Q00535 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.95□□□□□ -0.02
CDK5Q00535 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDK5Q00535 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms