Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.72■□□□□ 0.27
VCLP18206 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.72■□□□□ 0.27
VCLP18206 CXCL1P1-201ENST00000502804 216 ntBASIC16.72■□□□□ 0.27
VCLP18206 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.72■□□□□ 0.27
VCLP18206 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
VCLP18206 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.72■□□□□ 0.27
VCLP18206 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VCLP18206 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VCLP18206 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.72■□□□□ 0.27
VCLP18206 CYP2T1P-202ENST00000641596 2535 ntBASIC16.72■□□□□ 0.27
VCLP18206 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
VCLP18206 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
VCLP18206 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.72■□□□□ 0.27
VCLP18206 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.72■□□□□ 0.27
VCLP18206 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
VCLP18206 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VCLP18206 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VCLP18206 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
VCLP18206 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
VCLP18206 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
VCLP18206 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
VCLP18206 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
VCLP18206 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.71■□□□□ 0.27
VCLP18206 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.71■□□□□ 0.27
VCLP18206 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
VCLP18206 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.71■□□□□ 0.27
VCLP18206 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
VCLP18206 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VCLP18206 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.71■□□□□ 0.27
VCLP18206 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VCLP18206 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VCLP18206 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.71■□□□□ 0.27
VCLP18206 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.71■□□□□ 0.27
VCLP18206 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VCLP18206 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.71■□□□□ 0.27
VCLP18206 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VCLP18206 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
VCLP18206 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.71■□□□□ 0.27
VCLP18206 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
VCLP18206 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VCLP18206 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.71■□□□□ 0.27
VCLP18206 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.71■□□□□ 0.27
VCLP18206 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.71■□□□□ 0.27
VCLP18206 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.71■□□□□ 0.27
VCLP18206 AC096734.2-201ENST00000562054 433 ntBASIC16.71■□□□□ 0.27
VCLP18206 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.71■□□□□ 0.27
VCLP18206 AL671883.3-201ENST00000603274 991 ntBASIC16.71■□□□□ 0.27
VCLP18206 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VCLP18206 AC007064.4-201ENST00000637740 555 ntBASIC16.71■□□□□ 0.27
VCLP18206 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VCLP18206 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
VCLP18206 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
VCLP18206 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VCLP18206 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.71■□□□□ 0.27
VCLP18206 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VCLP18206 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VCLP18206 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
VCLP18206 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
VCLP18206 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VCLP18206 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.71■□□□□ 0.27
VCLP18206 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
VCLP18206 AC023824.1-201ENST00000562945 2975 ntBASIC16.71■□□□□ 0.26
VCLP18206 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCLP18206 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCLP18206 AL513523.2-202ENST00000427283 2040 ntBASIC16.7■□□□□ 0.26
VCLP18206 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCLP18206 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCLP18206 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCLP18206 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
VCLP18206 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VCLP18206 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VCLP18206 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCLP18206 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
VCLP18206 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.7■□□□□ 0.26
VCLP18206 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCLP18206 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VCLP18206 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCLP18206 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.7■□□□□ 0.26
VCLP18206 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.7■□□□□ 0.26
VCLP18206 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VCLP18206 AP002490.2-201ENST00000524791 560 ntBASIC16.7■□□□□ 0.26
VCLP18206 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.7■□□□□ 0.26
VCLP18206 AC002347.1-201ENST00000569543 541 ntBASIC16.7■□□□□ 0.26
VCLP18206 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.7■□□□□ 0.26
VCLP18206 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
VCLP18206 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCLP18206 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCLP18206 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.7■□□□□ 0.26
VCLP18206 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
VCLP18206 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VCLP18206 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.7■□□□□ 0.26
VCLP18206 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.7■□□□□ 0.26
VCLP18206 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.7■□□□□ 0.26
VCLP18206 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
VCLP18206 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
VCLP18206 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCLP18206 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCLP18206 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCLP18206 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
VCLP18206 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms