Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
TMEM238C9JI98 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM238C9JI98 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM238C9JI98 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM238C9JI98 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM238C9JI98 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC11.74□□□□□ -0.53
TMEM238C9JI98 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM238C9JI98 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM238C9JI98 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM238C9JI98 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
TMEM238C9JI98 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM238C9JI98 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM238C9JI98 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM238C9JI98 NIFKP9-201ENST00000419265 221 ntBASIC11.74□□□□□ -0.53
TMEM238C9JI98 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC11.74□□□□□ -0.53
TMEM238C9JI98 AC004980.1-204ENST00000429707 299 ntBASIC11.74□□□□□ -0.53
TMEM238C9JI98 RPS2P4-201ENST00000476944 856 ntBASIC11.74□□□□□ -0.53
TMEM238C9JI98 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC11.74□□□□□ -0.53
TMEM238C9JI98 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM238C9JI98 KRT18P6-201ENST00000555540 1265 ntBASIC11.74□□□□□ -0.53
TMEM238C9JI98 EMC9-206ENST00000560403 872 ntTSL 2 BASIC11.74□□□□□ -0.53
TMEM238C9JI98 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
TMEM238C9JI98 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC11.74□□□□□ -0.53
TMEM238C9JI98 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
TMEM238C9JI98 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM238C9JI98 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM238C9JI98 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM238C9JI98 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM238C9JI98 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM238C9JI98 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM238C9JI98 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM238C9JI98 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM238C9JI98 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM238C9JI98 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
TMEM238C9JI98 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM238C9JI98 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
TMEM238C9JI98 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM238C9JI98 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM238C9JI98 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
TMEM238C9JI98 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC11.74□□□□□ -0.53
TMEM238C9JI98 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
TMEM238C9JI98 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM238C9JI98 OS9-207ENST00000439210 1946 ntTSL 2 BASIC11.74□□□□□ -0.53
TMEM238C9JI98 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM238C9JI98 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM238C9JI98 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM238C9JI98 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
TMEM238C9JI98 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TMEM238C9JI98 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TMEM238C9JI98 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC11.73□□□□□ -0.53
TMEM238C9JI98 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TMEM238C9JI98 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TMEM238C9JI98 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TMEM238C9JI98 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
TMEM238C9JI98 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TMEM238C9JI98 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TMEM238C9JI98 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
TMEM238C9JI98 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TMEM238C9JI98 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TMEM238C9JI98 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
TMEM238C9JI98 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TMEM238C9JI98 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TMEM238C9JI98 ISG20-202ENST00000379224 540 ntTSL 3 BASIC11.73□□□□□ -0.53
TMEM238C9JI98 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TMEM238C9JI98 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC11.73□□□□□ -0.53
TMEM238C9JI98 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
TMEM238C9JI98 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TMEM238C9JI98 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
TMEM238C9JI98 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC11.73□□□□□ -0.53
TMEM238C9JI98 KRT18P23-201ENST00000435622 1283 ntBASIC11.73□□□□□ -0.53
TMEM238C9JI98 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC11.73□□□□□ -0.53
TMEM238C9JI98 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
TMEM238C9JI98 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC11.73□□□□□ -0.53
TMEM238C9JI98 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC11.73□□□□□ -0.53
TMEM238C9JI98 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC11.73□□□□□ -0.53
TMEM238C9JI98 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC11.73□□□□□ -0.53
TMEM238C9JI98 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TMEM238C9JI98 ST20-AS1-201ENST00000560255 4223 ntBASIC11.73□□□□□ -0.53
TMEM238C9JI98 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC11.73□□□□□ -0.53
TMEM238C9JI98 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC11.73□□□□□ -0.53
TMEM238C9JI98 AC006058.3-201ENST00000606217 1069 ntBASIC11.73□□□□□ -0.53
TMEM238C9JI98 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC11.73□□□□□ -0.53
TMEM238C9JI98 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TMEM238C9JI98 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC11.73□□□□□ -0.53
TMEM238C9JI98 CABP2-204ENST00000636477 941 ntTSL 5 BASIC11.73□□□□□ -0.53
TMEM238C9JI98 BX276092.7-203ENST00000637198 1536 ntBASIC11.73□□□□□ -0.53
TMEM238C9JI98 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC11.73□□□□□ -0.53
TMEM238C9JI98 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC11.73□□□□□ -0.53
TMEM238C9JI98 AC073648.6-201ENST00000641589 218 ntBASIC11.73□□□□□ -0.53
TMEM238C9JI98 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TMEM238C9JI98 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TMEM238C9JI98 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
TMEM238C9JI98 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TMEM238C9JI98 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TMEM238C9JI98 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TMEM238C9JI98 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC11.73□□□□□ -0.53
TMEM238C9JI98 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TMEM238C9JI98 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TMEM238C9JI98 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC11.73□□□□□ -0.53
TMEM238C9JI98 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms