Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 AL589182.2-201ENST00000619332 1049 ntBASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 AL139288.1-201ENST00000623748 933 ntBASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.26
TRIM49D1C9J1S8 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TRIM49D1C9J1S8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TRIM49D1C9J1S8 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 PKD1P5-201ENST00000532415 10291 ntBASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 PMS2P1-201ENST00000431037 1228 ntBASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 POU5F1P6-201ENST00000466990 990 ntBASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 AC091167.2-201ENST00000579581 588 ntBASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 AC069148.1-201ENST00000608741 768 ntBASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 AP000550.4-202ENST00000639755 178 ntBASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 AC104640.1-201ENST00000562617 2109 ntBASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM49D1C9J1S8 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 SLC22A20-204ENST00000530038 1673 ntBASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 AL356309.3-201ENST00000624132 1934 ntBASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 LINC01144-201ENST00000626198 1710 ntBASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 CYP2A7P1-201ENST00000595391 815 ntBASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms