Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBQLN1Q9UMX0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBQLN1Q9UMX0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBQLN1Q9UMX0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.73■□□□□ 0.43
UBQLN1Q9UMX0 LINC01144-201ENST00000626198 1710 ntBASIC17.73■□□□□ 0.43
UBQLN1Q9UMX0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
UBQLN1Q9UMX0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBQLN1Q9UMX0 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBQLN1Q9UMX0 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBQLN1Q9UMX0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
UBQLN1Q9UMX0 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBQLN1Q9UMX0 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBQLN1Q9UMX0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBQLN1Q9UMX0 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBQLN1Q9UMX0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.73■□□□□ 0.43
UBQLN1Q9UMX0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.73■□□□□ 0.43
UBQLN1Q9UMX0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.73■□□□□ 0.43
UBQLN1Q9UMX0 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.73■□□□□ 0.43
UBQLN1Q9UMX0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.73■□□□□ 0.43
UBQLN1Q9UMX0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.73■□□□□ 0.43
UBQLN1Q9UMX0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBQLN1Q9UMX0 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
UBQLN1Q9UMX0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.73■□□□□ 0.43
UBQLN1Q9UMX0 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBQLN1Q9UMX0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
UBQLN1Q9UMX0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBQLN1Q9UMX0 TUBB3P1-201ENST00000405796 1332 ntBASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 AC008677.1-201ENST00000519230 1561 ntBASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 FAM220BP-201ENST00000377689 816 ntBASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 AC093512.1-201ENST00000617969 520 ntBASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN1Q9UMX0 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 AC051619.7-201ENST00000568314 623 ntBASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
UBQLN1Q9UMX0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms