Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TREML4Q6UXN2 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.68□□□□□ -0.22
TREML4Q6UXN2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 FER1L4-210ENST00000615531 5998 ntBASIC13.67□□□□□ -0.22
TREML4Q6UXN2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 AC010460.3-201ENST00000511359 1579 ntBASIC13.67□□□□□ -0.22
TREML4Q6UXN2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 AC190387.1-201ENST00000551683 408 ntBASIC13.67□□□□□ -0.22
TREML4Q6UXN2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 AC004449.1-201ENST00000564240 433 ntBASIC13.67□□□□□ -0.22
TREML4Q6UXN2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 RN7SL440P-201ENST00000577855 343 ntBASIC13.67□□□□□ -0.22
TREML4Q6UXN2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 AC115989.2-201ENST00000578640 563 ntBASIC13.67□□□□□ -0.22
TREML4Q6UXN2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TREML4Q6UXN2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 IGHV3-52-201ENST00000519770 353 ntBASIC13.66□□□□□ -0.22
TREML4Q6UXN2 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 AC138761.1-201ENST00000584393 385 ntBASIC13.66□□□□□ -0.22
TREML4Q6UXN2 AC060766.1-201ENST00000590824 627 ntBASIC13.66□□□□□ -0.22
TREML4Q6UXN2 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 AC027612.4-201ENST00000605371 583 ntBASIC13.66□□□□□ -0.22
TREML4Q6UXN2 AC093512.1-201ENST00000617969 520 ntBASIC13.66□□□□□ -0.22
TREML4Q6UXN2 AL512356.3-201ENST00000623005 461 ntBASIC13.66□□□□□ -0.22
TREML4Q6UXN2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms