Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.85■□□□□ 0.29
KHDC1Q4VXA5 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
KHDC1Q4VXA5 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 AL365203.3-201ENST00000609742 2057 ntBASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 AC104640.1-201ENST00000562617 2109 ntBASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 MIR940-201ENST00000401276 94 ntBASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 PRSS29P-201ENST00000440800 595 ntBASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 POLD2P1-201ENST00000511220 997 ntBASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 AC107918.2-201ENST00000530817 355 ntBASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 AC010654.1-201ENST00000615722 808 ntBASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KHDC1Q4VXA5 AC144831.1-201ENST00000573312 2656 ntBASIC16.83■□□□□ 0.29
KHDC1Q4VXA5 AC092384.3-202ENST00000564646 2873 ntBASIC16.83■□□□□ 0.29
KHDC1Q4VXA5 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
KHDC1Q4VXA5 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
KHDC1Q4VXA5 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.83■□□□□ 0.29
KHDC1Q4VXA5 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
KHDC1Q4VXA5 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
KHDC1Q4VXA5 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KHDC1Q4VXA5 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
KHDC1Q4VXA5 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KHDC1Q4VXA5 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KHDC1Q4VXA5 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KHDC1Q4VXA5 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.83■□□□□ 0.28
KHDC1Q4VXA5 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.83■□□□□ 0.28
KHDC1Q4VXA5 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KHDC1Q4VXA5 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
KHDC1Q4VXA5 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KHDC1Q4VXA5 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.83■□□□□ 0.28
KHDC1Q4VXA5 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
KHDC1Q4VXA5 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.83■□□□□ 0.28
KHDC1Q4VXA5 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.83■□□□□ 0.28
KHDC1Q4VXA5 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.83■□□□□ 0.28
KHDC1Q4VXA5 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.83■□□□□ 0.28
KHDC1Q4VXA5 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KHDC1Q4VXA5 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.83■□□□□ 0.28
KHDC1Q4VXA5 AC064836.3-201ENST00000607928 673 ntBASIC16.83■□□□□ 0.28
KHDC1Q4VXA5 REXO1L3P-201ENST00000622202 1288 ntBASIC16.83■□□□□ 0.28
KHDC1Q4VXA5 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.83■□□□□ 0.28
KHDC1Q4VXA5 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.83■□□□□ 0.28
KHDC1Q4VXA5 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
KHDC1Q4VXA5 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
KHDC1Q4VXA5 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
KHDC1Q4VXA5 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KHDC1Q4VXA5 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
KHDC1Q4VXA5 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KHDC1Q4VXA5 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KHDC1Q4VXA5 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KHDC1Q4VXA5 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.82■□□□□ 0.28
KHDC1Q4VXA5 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KHDC1Q4VXA5 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KHDC1Q4VXA5 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KHDC1Q4VXA5 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KHDC1Q4VXA5 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
KHDC1Q4VXA5 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.82■□□□□ 0.28
KHDC1Q4VXA5 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.82■□□□□ 0.28
KHDC1Q4VXA5 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KHDC1Q4VXA5 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KHDC1Q4VXA5 CRYGEP-201ENST00000412192 528 ntBASIC16.82■□□□□ 0.28
KHDC1Q4VXA5 MED15P5-201ENST00000423150 992 ntBASIC16.82■□□□□ 0.28
KHDC1Q4VXA5 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.82■□□□□ 0.28
KHDC1Q4VXA5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.82■□□□□ 0.28
KHDC1Q4VXA5 AC124947.2-201ENST00000547118 1133 ntBASIC16.82■□□□□ 0.28
KHDC1Q4VXA5 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.82■□□□□ 0.28
KHDC1Q4VXA5 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.82■□□□□ 0.28
KHDC1Q4VXA5 AC027601.4-201ENST00000611259 610 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms