Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
ATP1B3P54709 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.46□□□□□ -0.09
ATP1B3P54709 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.46□□□□□ -0.09
ATP1B3P54709 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.46□□□□□ -0.09
ATP1B3P54709 AC006277.1-201ENST00000624348 1610 ntBASIC14.46□□□□□ -0.09
ATP1B3P54709 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATP1B3P54709 HCG4P8-203ENST00000443049 980 ntBASIC14.46□□□□□ -0.09
ATP1B3P54709 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATP1B3P54709 SCARNA2-201ENST00000458748 420 ntBASIC14.46□□□□□ -0.09
ATP1B3P54709 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
ATP1B3P54709 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ATP1B3P54709 LINC01711-201ENST00000598340 967 ntBASIC14.46□□□□□ -0.09
ATP1B3P54709 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.46□□□□□ -0.09
ATP1B3P54709 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.46□□□□□ -0.09
ATP1B3P54709 AL355877.3-201ENST00000622820 899 ntBASIC14.46□□□□□ -0.09
ATP1B3P54709 AL139011.1-202ENST00000642063 584 ntBASIC14.46□□□□□ -0.09
ATP1B3P54709 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATP1B3P54709 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ATP1B3P54709 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ATP1B3P54709 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ATP1B3P54709 DBET-201ENST00000630918 3363 ntBASIC14.46□□□□□ -0.1
ATP1B3P54709 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.1
ATP1B3P54709 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.46□□□□□ -0.1
ATP1B3P54709 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.46□□□□□ -0.1
ATP1B3P54709 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATP1B3P54709 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATP1B3P54709 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATP1B3P54709 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.45□□□□□ -0.1
ATP1B3P54709 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATP1B3P54709 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATP1B3P54709 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ATP1B3P54709 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATP1B3P54709 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
ATP1B3P54709 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ATP1B3P54709 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATP1B3P54709 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATP1B3P54709 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
ATP1B3P54709 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATP1B3P54709 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATP1B3P54709 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ATP1B3P54709 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.45□□□□□ -0.1
ATP1B3P54709 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.45□□□□□ -0.1
ATP1B3P54709 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATP1B3P54709 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.45□□□□□ -0.1
ATP1B3P54709 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.45□□□□□ -0.1
ATP1B3P54709 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.45□□□□□ -0.1
ATP1B3P54709 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ATP1B3P54709 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.45□□□□□ -0.1
ATP1B3P54709 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.45□□□□□ -0.1
ATP1B3P54709 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.45□□□□□ -0.1
ATP1B3P54709 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.45□□□□□ -0.1
ATP1B3P54709 KRT18P31-201ENST00000506277 1292 ntBASIC14.45□□□□□ -0.1
ATP1B3P54709 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.45□□□□□ -0.1
ATP1B3P54709 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATP1B3P54709 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.45□□□□□ -0.1
ATP1B3P54709 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATP1B3P54709 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATP1B3P54709 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATP1B3P54709 AC091304.2-201ENST00000564639 760 ntBASIC14.45□□□□□ -0.1
ATP1B3P54709 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.45□□□□□ -0.1
ATP1B3P54709 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.45□□□□□ -0.1
ATP1B3P54709 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATP1B3P54709 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.45□□□□□ -0.1
ATP1B3P54709 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATP1B3P54709 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATP1B3P54709 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATP1B3P54709 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.45□□□□□ -0.1
ATP1B3P54709 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.45□□□□□ -0.1
ATP1B3P54709 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATP1B3P54709 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATP1B3P54709 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.45□□□□□ -0.1
ATP1B3P54709 TOP3BP1-201ENST00000420768 1380 ntBASIC14.45□□□□□ -0.1
ATP1B3P54709 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ATP1B3P54709 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATP1B3P54709 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATP1B3P54709 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ATP1B3P54709 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATP1B3P54709 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATP1B3P54709 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATP1B3P54709 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATP1B3P54709 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
ATP1B3P54709 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.44□□□□□ -0.1
ATP1B3P54709 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ATP1B3P54709 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATP1B3P54709 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.44□□□□□ -0.1
ATP1B3P54709 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATP1B3P54709 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATP1B3P54709 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
ATP1B3P54709 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATP1B3P54709 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATP1B3P54709 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.44□□□□□ -0.1
ATP1B3P54709 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ATP1B3P54709 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.44□□□□□ -0.1
ATP1B3P54709 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.44□□□□□ -0.1
ATP1B3P54709 PRELID1P1-202ENST00000567272 903 ntBASIC14.44□□□□□ -0.1
ATP1B3P54709 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.44□□□□□ -0.1
ATP1B3P54709 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.44□□□□□ -0.1
ATP1B3P54709 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.44□□□□□ -0.1
ATP1B3P54709 MTDHP4-201ENST00000600287 670 ntBASIC14.44□□□□□ -0.1
ATP1B3P54709 AC008608.2-201ENST00000606089 416 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms