Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC13.94□□□□□ -0.18
SIX6O95475 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.94□□□□□ -0.18
SIX6O95475 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.94□□□□□ -0.18
SIX6O95475 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC13.94□□□□□ -0.18
SIX6O95475 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.94□□□□□ -0.18
SIX6O95475 TEN1-204ENST00000588202 862 ntTSL 3 BASIC13.94□□□□□ -0.18
SIX6O95475 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC13.94□□□□□ -0.18
SIX6O95475 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIX6O95475 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIX6O95475 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SIX6O95475 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.94□□□□□ -0.18
SIX6O95475 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIX6O95475 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIX6O95475 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.94□□□□□ -0.18
SIX6O95475 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SIX6O95475 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.94□□□□□ -0.18
SIX6O95475 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIX6O95475 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.94□□□□□ -0.18
SIX6O95475 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.94□□□□□ -0.18
SIX6O95475 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.94□□□□□ -0.18
SIX6O95475 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIX6O95475 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SIX6O95475 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SIX6O95475 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIX6O95475 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIX6O95475 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIX6O95475 REXO1L8P-201ENST00000604378 1897 ntBASIC13.93□□□□□ -0.18
SIX6O95475 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
SIX6O95475 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SIX6O95475 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SIX6O95475 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIX6O95475 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIX6O95475 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SIX6O95475 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
SIX6O95475 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIX6O95475 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.93□□□□□ -0.18
SIX6O95475 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIX6O95475 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.93□□□□□ -0.18
SIX6O95475 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIX6O95475 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SIX6O95475 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIX6O95475 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC13.93□□□□□ -0.18
SIX6O95475 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.93□□□□□ -0.18
SIX6O95475 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIX6O95475 RPPH1-201ENST00000516869 333 ntBASIC13.93□□□□□ -0.18
SIX6O95475 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.93□□□□□ -0.18
SIX6O95475 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIX6O95475 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.93□□□□□ -0.18
SIX6O95475 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIX6O95475 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIX6O95475 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIX6O95475 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SIX6O95475 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIX6O95475 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SIX6O95475 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SIX6O95475 AC002310.6-201ENST00000624451 1377 ntBASIC13.93□□□□□ -0.18
SIX6O95475 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIX6O95475 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.93□□□□□ -0.18
SIX6O95475 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIX6O95475 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIX6O95475 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SIX6O95475 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SIX6O95475 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.93□□□□□ -0.18
SIX6O95475 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SIX6O95475 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.92□□□□□ -0.18
SIX6O95475 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SIX6O95475 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIX6O95475 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.92□□□□□ -0.18
SIX6O95475 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.92□□□□□ -0.18
SIX6O95475 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.92□□□□□ -0.18
SIX6O95475 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIX6O95475 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIX6O95475 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SIX6O95475 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIX6O95475 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.92□□□□□ -0.18
SIX6O95475 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.92□□□□□ -0.18
SIX6O95475 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SIX6O95475 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIX6O95475 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC13.92□□□□□ -0.18
SIX6O95475 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SIX6O95475 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.92□□□□□ -0.18
SIX6O95475 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC13.92□□□□□ -0.18
SIX6O95475 AC068472.1-201ENST00000474589 881 ntBASIC13.92□□□□□ -0.18
SIX6O95475 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SIX6O95475 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC13.92□□□□□ -0.18
SIX6O95475 AC104771.1-201ENST00000603335 964 ntBASIC13.92□□□□□ -0.18
SIX6O95475 AC006058.3-201ENST00000606217 1069 ntBASIC13.92□□□□□ -0.18
SIX6O95475 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SIX6O95475 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SIX6O95475 AC116562.4-202ENST00000641738 218 ntBASIC13.92□□□□□ -0.18
SIX6O95475 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIX6O95475 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIX6O95475 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
SIX6O95475 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.92□□□□□ -0.18
SIX6O95475 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.92□□□□□ -0.18
SIX6O95475 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIX6O95475 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIX6O95475 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SIX6O95475 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.92□□□□□ -0.18
SIX6O95475 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms