Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
SUPT3HO75486 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT3HO75486 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.54■□□□□ 0.24
SUPT3HO75486 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
SUPT3HO75486 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.54■□□□□ 0.24
SUPT3HO75486 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT3HO75486 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.54■□□□□ 0.24
SUPT3HO75486 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SUPT3HO75486 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.54■□□□□ 0.24
SUPT3HO75486 AC004706.3-202ENST00000621574 984 ntBASIC16.54■□□□□ 0.24
SUPT3HO75486 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SUPT3HO75486 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT3HO75486 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.54■□□□□ 0.24
SUPT3HO75486 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
SUPT3HO75486 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SUPT3HO75486 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.54■□□□□ 0.24
SUPT3HO75486 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT3HO75486 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT3HO75486 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT3HO75486 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT3HO75486 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT3HO75486 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT3HO75486 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT3HO75486 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT3HO75486 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.54■□□□□ 0.24
SUPT3HO75486 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SUPT3HO75486 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SUPT3HO75486 TOP3BP1-201ENST00000420768 1380 ntBASIC16.53■□□□□ 0.24
SUPT3HO75486 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SUPT3HO75486 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT3HO75486 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.53■□□□□ 0.24
SUPT3HO75486 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT3HO75486 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT3HO75486 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT3HO75486 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT3HO75486 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.53■□□□□ 0.24
SUPT3HO75486 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.53■□□□□ 0.24
SUPT3HO75486 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT3HO75486 SAPCD2P3-201ENST00000455031 850 ntBASIC16.53■□□□□ 0.24
SUPT3HO75486 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.53■□□□□ 0.24
SUPT3HO75486 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.53■□□□□ 0.24
SUPT3HO75486 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT3HO75486 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.53■□□□□ 0.24
SUPT3HO75486 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
SUPT3HO75486 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.53■□□□□ 0.24
SUPT3HO75486 AC013467.2-201ENST00000605472 835 ntBASIC16.53■□□□□ 0.24
SUPT3HO75486 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT3HO75486 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SUPT3HO75486 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SUPT3HO75486 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SUPT3HO75486 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT3HO75486 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT3HO75486 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT3HO75486 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SUPT3HO75486 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT3HO75486 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT3HO75486 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT3HO75486 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT3HO75486 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT3HO75486 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.53■□□□□ 0.24
SUPT3HO75486 PI4KAP1-204ENST00000612579 1703 ntBASIC16.53■□□□□ 0.24
SUPT3HO75486 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.53■□□□□ 0.24
SUPT3HO75486 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
SUPT3HO75486 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT3HO75486 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT3HO75486 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.53■□□□□ 0.24
SUPT3HO75486 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SUPT3HO75486 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT3HO75486 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT3HO75486 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT3HO75486 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SUPT3HO75486 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SUPT3HO75486 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SUPT3HO75486 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SUPT3HO75486 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SUPT3HO75486 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SUPT3HO75486 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SUPT3HO75486 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.52■□□□□ 0.24
SUPT3HO75486 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SUPT3HO75486 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SUPT3HO75486 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SUPT3HO75486 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SUPT3HO75486 AKR1C7P-201ENST00000305623 895 ntBASIC16.52■□□□□ 0.24
SUPT3HO75486 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SUPT3HO75486 PTCHD3P3-201ENST00000403073 906 ntBASIC16.52■□□□□ 0.24
SUPT3HO75486 ELK2BP-201ENST00000415014 1224 ntBASIC16.52■□□□□ 0.24
SUPT3HO75486 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.52■□□□□ 0.24
SUPT3HO75486 PAWRP1-201ENST00000451083 565 ntBASIC16.52■□□□□ 0.24
SUPT3HO75486 AC087163.2-201ENST00000457299 853 ntBASIC16.52■□□□□ 0.24
SUPT3HO75486 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.52■□□□□ 0.24
SUPT3HO75486 AC012313.10-201ENST00000623509 926 ntBASIC16.52■□□□□ 0.24
SUPT3HO75486 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.52■□□□□ 0.24
SUPT3HO75486 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SUPT3HO75486 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SUPT3HO75486 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SUPT3HO75486 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SUPT3HO75486 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SUPT3HO75486 AC132872.4-202ENST00000622924 2756 ntBASIC16.52■□□□□ 0.23
SUPT3HO75486 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SUPT3HO75486 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms