Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.46□□□□□ -0.1
HMX3A6NHT5 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMX3A6NHT5 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMX3A6NHT5 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMX3A6NHT5 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMX3A6NHT5 AL109954.1-202ENST00000564051 2148 ntBASIC14.45□□□□□ -0.1
HMX3A6NHT5 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMX3A6NHT5 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMX3A6NHT5 SSR4P1-203ENST00000599569 2260 ntBASIC14.45□□□□□ -0.1
HMX3A6NHT5 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
HMX3A6NHT5 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HMX3A6NHT5 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.45□□□□□ -0.1
HMX3A6NHT5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMX3A6NHT5 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMX3A6NHT5 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMX3A6NHT5 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.45□□□□□ -0.1
HMX3A6NHT5 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
HMX3A6NHT5 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HMX3A6NHT5 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMX3A6NHT5 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMX3A6NHT5 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMX3A6NHT5 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMX3A6NHT5 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMX3A6NHT5 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMX3A6NHT5 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
HMX3A6NHT5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.45□□□□□ -0.1
HMX3A6NHT5 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.45□□□□□ -0.1
HMX3A6NHT5 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.45□□□□□ -0.1
HMX3A6NHT5 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMX3A6NHT5 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
HMX3A6NHT5 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMX3A6NHT5 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HMX3A6NHT5 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMX3A6NHT5 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.45□□□□□ -0.1
HMX3A6NHT5 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMX3A6NHT5 KRT8P47-201ENST00000604727 1398 ntBASIC14.45□□□□□ -0.1
HMX3A6NHT5 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMX3A6NHT5 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMX3A6NHT5 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMX3A6NHT5 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMX3A6NHT5 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMX3A6NHT5 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.44□□□□□ -0.1
HMX3A6NHT5 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HMX3A6NHT5 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HMX3A6NHT5 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.44□□□□□ -0.1
HMX3A6NHT5 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.44□□□□□ -0.1
HMX3A6NHT5 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.44□□□□□ -0.1
HMX3A6NHT5 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HMX3A6NHT5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.44□□□□□ -0.1
HMX3A6NHT5 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HMX3A6NHT5 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
HMX3A6NHT5 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.44□□□□□ -0.1
HMX3A6NHT5 ECEL1P3-201ENST00000427961 737 ntBASIC14.44□□□□□ -0.1
HMX3A6NHT5 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.44□□□□□ -0.1
HMX3A6NHT5 MIR3180-4-201ENST00000582223 153 ntBASIC14.44□□□□□ -0.1
HMX3A6NHT5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
HMX3A6NHT5 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
HMX3A6NHT5 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.44□□□□□ -0.1
HMX3A6NHT5 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HMX3A6NHT5 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HMX3A6NHT5 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.44□□□□□ -0.1
HMX3A6NHT5 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.44□□□□□ -0.1
HMX3A6NHT5 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.44□□□□□ -0.1
HMX3A6NHT5 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HMX3A6NHT5 AL161772.1-201ENST00000610494 4412 ntBASIC14.44□□□□□ -0.1
HMX3A6NHT5 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.44□□□□□ -0.1
HMX3A6NHT5 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMX3A6NHT5 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms